Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A15
         (583 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   3.8  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.7  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    21   8.9  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   8.9  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = -2

Query: 573  HIINIEMAPNLSWISIMANHKDPPAADSASTTVTKVYLEDYFALYTLFIIIIR 415
            H + +E+    + + +  +H+D P    AST    V LE   A   + I++ R
Sbjct: 1082 HSLAVELEHGAAGLRLCLHHRDLPCVLRASTP-APVVLEAVHASRRVLIVLTR 1133


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 576 SHIINIEMAPNLSWISIMANHKDP 505
           SH IN    PNL+   +  N  DP
Sbjct: 575 SHFINHSCDPNLAVYGVWINCLDP 598


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 543 LSWISIMANHKDPPAADSASTTVTKVYLEDYFALY 439
           L+    M NH  PP   S S    ++  E YF L+
Sbjct: 228 LNHFYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLH 262


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 543 LSWISIMANHKDPPAADSASTTVTKVYLEDYFALY 439
           L+    M NH  PP   S S    ++  E YF L+
Sbjct: 228 LNHFYFMLNHNYPPFMLSNSLNFPQIRGEFYFFLH 262


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 435 LFIIIIRKKKNVNGIIRDLPYNT 367
           L+II+IR ++NV   +    Y+T
Sbjct: 902 LYIILIRPERNVRQSMMPTRYST 924


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 206 HYPLNPPVPP 235
           H P  PP+PP
Sbjct: 102 HIPTAPPIPP 111


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 322 VNKIVGHQSDTGATRSS 272
           VN  +GH    GAT SS
Sbjct: 167 VNYTLGHHHQNGATPSS 183


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,024
Number of Sequences: 438
Number of extensions: 4326
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)