Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_A12
(255 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0039 - 319871-319914,320021-320084,320198-320263,320397-32... 57 2e-09
11_01_0040 - 304439-304482,304589-304652,304766-304831,305509-30... 52 8e-08
04_01_0213 - 2692253-2694562 30 0.22
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 29 0.52
06_03_1183 + 28237467-28237612,28238035-28238089,28238216-282383... 28 0.90
01_07_0254 + 42318181-42319471,42319581-42319792,42319909-423201... 28 1.2
01_01_0195 + 1697447-1697691,1698150-1698808,1699754-1701570,170... 27 2.1
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 26 3.6
05_06_0124 - 25822176-25822633,25822738-25825420 26 4.8
04_01_0304 + 4136261-4136294,4136360-4136436,4136555-4136634,413... 26 4.8
02_01_0478 - 3442222-3442227,3442777-3442848,3442966-3443137,344... 26 4.8
12_02_0056 + 12955832-12956410,12957398-12957499 25 6.4
11_01_0583 + 4636832-4637521 25 6.4
11_01_0581 + 4627671-4628315,4630427-4630522,4630689-4630886 25 6.4
10_08_0529 - 18565749-18565804,18566022-18566128,18566206-185664... 25 6.4
08_01_0279 - 2277487-2278161,2278513-2278662,2278749-2278843,227... 25 6.4
06_03_0878 + 25606788-25606926,25607205-25607279,25607362-256074... 25 6.4
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 25 8.4
01_07_0386 + 43218686-43218745,43218972-43219190,43219307-432193... 25 8.4
01_06_1632 + 38763721-38764033,38764196-38764641 25 8.4
>12_01_0039 -
319871-319914,320021-320084,320198-320263,320397-320458,
321211-321298,321401-321461,321542-321625,322332-322630
Length = 255
Score = 57.2 bits (132), Expect = 2e-09
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = -2
Query: 215 CKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLM 36
C+ ++ QI E +AS Y ++ A+F RD + GFAK F +++ EER+HA KL+ Y M
Sbjct: 91 CEAAISEQINVEFNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEERDHAEKLMKYQNM 150
Query: 35 RG 30
RG
Sbjct: 151 RG 152
>11_01_0040 -
304439-304482,304589-304652,304766-304831,305509-305640,
305744-305804,305885-306018,306310-306654
Length = 281
Score = 51.6 bits (118), Expect = 8e-08
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = -2
Query: 182 EVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLMRG 30
E +AS Y ++ A+F RD + GFAK F +++ EER+HA KLI Y MRG
Sbjct: 134 EYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEERDHAEKLIKYQNMRG 184
>04_01_0213 - 2692253-2694562
Length = 769
Score = 30.3 bits (65), Expect = 0.22
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 18 KNKLSPHEQVVDQLHRMLPLFASRVEEQLRESWTIDH---VTGEMGTHCQILYGRVHLSL 188
+ K+ +EQ++ H ML + + + +D V E ++LY V + L
Sbjct: 201 RRKMDNNEQILLAAHDMLHITKGAFIDNMAYEHDVDKQEIVRPETWNENEMLYDVVDMEL 260
Query: 189 YLRVHAVFTRIVHCHPFGGY 248
L ++T+ H +GGY
Sbjct: 261 SLMYDILYTKAAMVHTWGGY 280
>07_03_0603 -
19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 29.1 bits (62), Expect = 0.52
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 66 MLPLFASRVEEQLRESWTIDHVTGEMGTH 152
M P A+ + + LRE ++D VT MG+H
Sbjct: 169 MTPAMAASLRDSLREVCSLDDVTERMGSH 197
>06_03_1183 +
28237467-28237612,28238035-28238089,28238216-28238354,
28238433-28238487,28238578-28238646,28239338-28239560,
28239645-28239740,28240708-28240827,28240937-28241062,
28241369-28241524,28242706-28242828,28242913-28242980,
28243119-28243254,28243365-28243530,28243615-28243853
Length = 638
Score = 28.3 bits (60), Expect = 0.90
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 212 KDSMHAQIQTEVDASVQYLAMGA-HFSRDVINRPGFAKLF 96
++ M A++Q + YL A FS +V+N+PGF ++
Sbjct: 131 RNCMSARLQLTISKRSHYLVTFACWFSENVMNKPGFVDIY 170
>01_07_0254 +
42318181-42319471,42319581-42319792,42319909-42320132,
42320232-42321009
Length = 834
Score = 27.9 bits (59), Expect = 1.2
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 3 DLITVKNKLSPHE--QVVDQLHRMLPLFASRVEEQLRESWTIDHVTGEMGTHCQILYGRV 176
D + V +S +E + +DQ +++ + E++ R+ DH + + ++L +
Sbjct: 687 DWLQVIEMVSKNEVLKTIDQFSKLVHEYKKTQEKEHRQKRKADHASRDYNKRRKVLQREL 746
Query: 177 HLSLYLRVHAVFTRIVHCH 233
LS L + AV H H
Sbjct: 747 GLSTSLDMVAVMENTHHSH 765
>01_01_0195 +
1697447-1697691,1698150-1698808,1699754-1701570,
1701700-1701771
Length = 930
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 214 VKTACTRKYKLRWTRPYNIWQWVPISPVT 128
++ T K RW PYN+ Q P PVT
Sbjct: 89 IRVQITDADKPRWEVPYNLLQREPAPPVT 117
>03_02_0143 -
5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 91 SKNSFANPGRLITSREKWAPIARYCTDASTSVCI 192
+KN ++T+ EKW I R +D S S+ +
Sbjct: 529 TKNEIEETQMIVTTPEKWDVITRKSSDMSLSMLV 562
>05_06_0124 - 25822176-25822633,25822738-25825420
Length = 1046
Score = 25.8 bits (54), Expect = 4.8
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -1
Query: 237 MGDNAQSL*RQHARANTN*GGRVRTISGNGCPFLP*RDQSSR 112
M D Q L R G+V G+G PFLP R S R
Sbjct: 985 MRDVLQILVRCEQALQNTVDGKVAEYDGDGAPFLPIRGGSRR 1026
>04_01_0304 +
4136261-4136294,4136360-4136436,4136555-4136634,
4137244-4137310,4137975-4138166,4138763-4139059
Length = 248
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 118 RLITSREKWAPIARYCTDASTSVCICACML 207
RL +R +W P R T + IC C +
Sbjct: 194 RLEEARSRWTPRTRRGTPLGVAAAICLCTI 223
>02_01_0478 -
3442222-3442227,3442777-3442848,3442966-3443137,
3443388-3443500,3443771-3443908,3444016-3444221,
3444317-3444388,3444484-3444532,3444635-3444714,
3444817-3445132,3445242-3445415,3445513-3446139,
3446235-3446297,3446399-3446470,3446602-3446664,
3446741-3446872,3447779-3447889,3449273-3449371,
3450117-3450194
Length = 880
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = -2
Query: 254 ANVSSEWVTMHNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINR 117
++ S+ +N C+D + + +Q +DAS + A+ + NR
Sbjct: 509 SHFSANHAAKNNSCEDVLISALQILIDASASHFVRAAYNNASAENR 554
>12_02_0056 + 12955832-12956410,12957398-12957499
Length = 226
Score = 25.4 bits (53), Expect = 6.4
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +1
Query: 169 DASTSVCICACMLSL 213
D TSVC+CAC+ ++
Sbjct: 201 DEVTSVCVCACVTAI 215
>11_01_0583 + 4636832-4637521
Length = 229
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +1
Query: 55 SFIACSLSSLAASKNSFANPGRLITSREKWAPIARYCTDASTSVCICAC 201
++ A SL+ + + ANP + T E+W T C+ +C
Sbjct: 78 TYEATSLAESMIATTTAANPANIATFFEQWKGDEAITTKTPPGKCLLSC 126
>11_01_0581 + 4627671-4628315,4630427-4630522,4630689-4630886
Length = 312
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/49 (24%), Positives = 21/49 (42%)
Frame = +1
Query: 55 SFIACSLSSLAASKNSFANPGRLITSREKWAPIARYCTDASTSVCICAC 201
++ A SL+ + + ANP + T E+W T C+ +C
Sbjct: 78 TYEATSLAESMIATTTAANPANIATFFEQWKGDEAITTKTPPGKCLLSC 126
>10_08_0529 -
18565749-18565804,18566022-18566128,18566206-18566410,
18566500-18566812
Length = 226
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 98 TASRILDD*SRHGRNGHPLPDIVRT 172
TA+RIL+ H R G + DIVRT
Sbjct: 9 TAARILELDPAHPRAGRVIDDIVRT 33
>08_01_0279 -
2277487-2278161,2278513-2278662,2278749-2278843,
2279367-2279865
Length = 472
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 52 ISFIACSLSSLAASKNSFANPGRLITSREKW 144
+ FI + AASK +FA+ R I + E+W
Sbjct: 84 LRFIGKTAEEYAASKAAFASRPRRIETAEEW 114
>06_03_0878 +
25606788-25606926,25607205-25607279,25607362-25607426,
25607504-25607606,25607712-25607762,25608271-25608424,
25608781-25608925,25609039-25609144,25609267-25609415
Length = 328
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = -2
Query: 140 FSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLMRGELIFDGDKI 3
F+ DVI LFF A + H + + YL + F D++
Sbjct: 216 FAADVIYSDDLTDLFFSIAKKLMSHGAEKVLYLTLEKRYNFSMDEL 261
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 81 ASRVEEQLRESWTIDHV 131
A+RV ++ ESWTID V
Sbjct: 401 AARVVTRMEESWTIDDV 417
>01_07_0386 +
43218686-43218745,43218972-43219190,43219307-43219391,
43219583-43219713,43219802-43219900,43219984-43220088,
43220190-43220264,43222006-43222092,43222129-43222173
Length = 301
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 144 GTHCQILYGRVHLSLYLRVHAVFTR 218
G H Q +YG + ++LY V A F R
Sbjct: 76 GLHRQCVYGGLRIALYEPVKAFFIR 100
>01_06_1632 + 38763721-38764033,38764196-38764641
Length = 252
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 1 AILSPSKISSPLMSK*SISFIACSLSSLAASKNSFANP 114
+++ +S P+ S +IS + LSSL S NSF+ P
Sbjct: 96 SMIEDLNLSGPIPS--NISLLVPQLSSLDLSYNSFSGP 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,680,145
Number of Sequences: 37544
Number of extensions: 148481
Number of successful extensions: 435
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 435
length of database: 14,793,348
effective HSP length: 63
effective length of database: 12,428,076
effective search space used: 260989596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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