Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_A12
(255 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-11
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 1e-10
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-10
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-10
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-08
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 50 3e-07
SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26) 40 4e-04
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.60
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 29 0.60
SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3) 29 0.60
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10) 29 0.60
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 0.60
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.60
SB_19831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.79
SB_45259| Best HMM Match : CH (HMM E-Value=0.00071) 28 1.4
SB_26997| Best HMM Match : WD40 (HMM E-Value=1.3e-08) 28 1.4
SB_31035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_57416| Best HMM Match : rve (HMM E-Value=0.0011) 27 1.8
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021) 27 2.4
SB_58376| Best HMM Match : M20_dimer (HMM E-Value=0.00027) 27 2.4
SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_3591| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_43840| Best HMM Match : NDK (HMM E-Value=0) 27 3.2
SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_51565| Best HMM Match : MbeD_MobD (HMM E-Value=7.4) 26 5.6
SB_26584| Best HMM Match : Peptidase_M3 (HMM E-Value=0) 26 5.6
SB_19321| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 26 5.6
SB_38114| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.4
SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.4
SB_27422| Best HMM Match : Dynamin_N (HMM E-Value=3) 25 7.4
SB_1333| Best HMM Match : IncA (HMM E-Value=0.32) 25 7.4
SB_49893| Best HMM Match : ATP-synt_ab (HMM E-Value=0) 25 9.8
SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_28841| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_21192| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043) 25 9.8
SB_5870| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_43579| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.8
SB_41915| Best HMM Match : F5_F8_type_C (HMM E-Value=9.1e-13) 25 9.8
SB_12693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0014) 25 9.8
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 62.5 bits (145), Expect = 5e-11
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = -2
Query: 224 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 45
H C+ ++ QI E+ AS YL+M HF RD + PGF K F A+ EEREHA KL+ +
Sbjct: 196 HEECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKF 255
Query: 44 LLMRG 30
RG
Sbjct: 256 QNERG 260
Score = 41.9 bits (94), Expect = 8e-05
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2
Query: 146 AHFSRDVINRPGFAKLFFDAASEEREHAMKLIDYLLMRG 30
AHF RD I+ PGFA F AA EE HA +++L RG
Sbjct: 2 AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRG 40
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 61.3 bits (142), Expect = 1e-10
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = -2
Query: 224 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 45
H + ++ QI E+ AS Y++M HF RD + PGF K F +A+ EEREHA KL +
Sbjct: 143 HEESEAGVNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKF 202
Query: 44 LLMRG 30
L RG
Sbjct: 203 QLQRG 207
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 60.1 bits (139), Expect = 3e-10
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = -2
Query: 224 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 45
H + ++ QI E+ AS Y++M HF RD + PGF K F A+ EEREHA KL +
Sbjct: 128 HEESEAGVNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKF 187
Query: 44 LLMRG 30
L RG
Sbjct: 188 QLQRG 192
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 60.1 bits (139), Expect = 3e-10
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = -2
Query: 224 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLIDY 45
H + ++ QI E+ AS Y++M HF RD + PGF K F A+ EEREHA KL +
Sbjct: 11 HEESEAGVNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKF 70
Query: 44 LLMRG 30
L RG
Sbjct: 71 QLQRG 75
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 52.0 bits (119), Expect = 7e-08
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = -2
Query: 224 HNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMK 57
H C+ ++ QI E+ AS Y +M +F R+ ++ PGF K F A EEREHA K
Sbjct: 9 HEECEAGINKQINLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHAEK 64
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 50.0 bits (114), Expect = 3e-07
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = -2
Query: 221 NPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHA 63
N + ++ QI E+ A YL+M HF RD IN PGF K F A+ EE EHA
Sbjct: 32 NQLEGPINKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84
>SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26)
Length = 175
Score = 39.5 bits (88), Expect = 4e-04
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = -2
Query: 230 TMHNPCKDSMHAQIQTEVDASVQYLAMGAHFSRDVINRPGFAKLFFDAASEEREHAMKLI 51
++H + ++ Q + E DAS +YLAM A R+ A + + EEREH +K+
Sbjct: 10 SLHESVEKLLNLQSKIESDASTKYLAMAAWLDRNGFENT--AGYMYKQSEEEREHFLKVF 67
Query: 50 DYLLMRG 30
Y+ G
Sbjct: 68 KYITEMG 74
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -2
Query: 143 HFSRDVINRPGFAKLFFDAASEEREHA 63
HF RD IN PGF K F A+ EE EHA
Sbjct: 32 HFDRDDINLPGFNKFFKKASKEEWEHA 58
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 29.1 bits (62), Expect = 0.60
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 143 HFSRDVINRPGFAKLFFDAASE 78
HF+ IN+PG ++ FDAASE
Sbjct: 350 HFAVTNINKPGKLRIIFDAASE 371
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 29.1 bits (62), Expect = 0.60
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 143 HFSRDVINRPGFAKLFFDAASE 78
HF+ IN+PG ++ FDAASE
Sbjct: 868 HFAVTNINKPGKLRIIFDAASE 889
>SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)
Length = 249
Score = 29.1 bits (62), Expect = 0.60
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 143 HFSRDVINRPGFAKLFFDAASE 78
HF+ IN+PG ++ FDAASE
Sbjct: 30 HFAVTNINKPGKLRIIFDAASE 51
>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
Length = 475
Score = 29.1 bits (62), Expect = 0.60
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 143 HFSRDVINRPGFAKLFFDAASE 78
HF+ IN+PG ++ FDAASE
Sbjct: 151 HFAVTNINKPGKLRIIFDAASE 172
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 29.1 bits (62), Expect = 0.60
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 143 HFSRDVINRPGFAKLFFDAASE 78
HF+ IN+PG ++ FDAASE
Sbjct: 667 HFAVTNINKPGKLRIIFDAASE 688
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 29.1 bits (62), Expect = 0.60
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 143 HFSRDVINRPGFAKLFFDAASE 78
HF+ IN+PG ++ FDAASE
Sbjct: 945 HFAVTNINKPGKLRIIFDAASE 966
>SB_19831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 28.7 bits (61), Expect = 0.79
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = -1
Query: 147 CPFLP*RDQSSRIREAVLRRG*RREGACDEADRLLA 40
CP LP R+R VLR G E C A LA
Sbjct: 26 CPLLPSTSSPHRVRFRVLRNGDPLESTCRHASLALA 61
>SB_45259| Best HMM Match : CH (HMM E-Value=0.00071)
Length = 1032
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -2
Query: 218 PCKDSMHAQIQT-EVDASVQYLAMGAHFSRDVINR 117
PC S+H + + D VQ +A+ HFS+DV R
Sbjct: 360 PCT-SLHLYLPARDFDHEVQSIAISGHFSKDVTER 393
>SB_26997| Best HMM Match : WD40 (HMM E-Value=1.3e-08)
Length = 175
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 187 CICACMLSLQGLCIVTHSED 246
C C M QG C+VT SED
Sbjct: 98 CFCPLMSFRQGACVVTGSED 117
>SB_31035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 173 RPPQFVFARACCLYKDCALSPI 238
R P+FV R C L+ C L PI
Sbjct: 19 RRPRFVALRQCSLFNSCPLPPI 40
>SB_57416| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 807
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 143 HFSRDVINRPGFAKLFFDAASEEREHAM 60
HF N+PG ++ FDAA++ R +++
Sbjct: 138 HFGVTSANKPGCVRIVFDAAAKTRTNSL 165
>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
Length = 73
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 89 AASEEREHAMKLIDYLLMRG 30
A+ EEREHA KL + L RG
Sbjct: 3 ASHEEREHAEKLAKFQLQRG 22
>SB_58376| Best HMM Match : M20_dimer (HMM E-Value=0.00027)
Length = 517
Score = 27.1 bits (57), Expect = 2.4
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +3
Query: 84 SRVEEQLRESWTIDHVTGEMGTHCQILYGRVHLSLYLR 197
S + +Q++ +W + + E G I+ + L +YLR
Sbjct: 326 SAMRQQMKPTWRVHSIIAEGGVKPNIIPDKTKLEIYLR 363
>SB_23051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2141
Score = 27.1 bits (57), Expect = 2.4
Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Frame = +3
Query: 9 ITVKNKLSPHEQVVDQLHRMLPLFASRVEEQLRESWTIDHVTGEMGTHCQI-LYGRV--H 179
+T+ H +V H+ L + A + +WT H+T TH + + R H
Sbjct: 392 LTIVTWTHKHLTIVTWTHKHLTIVAWTHKHLTIVTWTHKHLTSGTWTHKHLTIVTRTHKH 451
Query: 180 LSLYLRVHAVFTRIVHCH 233
L++ R H T + H
Sbjct: 452 LTIVTRTHKHLTIVTWTH 469
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1
Query: 114 RIREAVLRRG*RREGACDEADRLLAHEGRAY 22
R EA++ +G EGACDE R L RA+
Sbjct: 3621 RALEAIISQGDAFEGACDEFLRWLTKTERAH 3651
>SB_3591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1585
Score = 26.6 bits (56), Expect = 3.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 54 QLHRMLPLFASRVEEQLRESWTIDHVTGEMGTH 152
Q+H LP++A RV L W + H T + H
Sbjct: 141 QMHSSLPVWAIRVIRALLSLWQLQHRTECLKQH 173
>SB_43840| Best HMM Match : NDK (HMM E-Value=0)
Length = 786
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -1
Query: 255 SKCILRMGDNA---QSL*RQHARANTN*GGRVRTISGNGCPFL 136
SKC+ R + ++ R + + + GGR R+ +GN PFL
Sbjct: 45 SKCLFRCSNGVLRNTAIRRVFSSQSGSSGGRSRSFAGNAAPFL 87
>SB_13054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 549
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 54 QLHRMLPLFASRVEEQLRESWTIDHVTGEMGTHCQILYGRVH 179
++H+ L VEE R+ +D M +CQ+ R+H
Sbjct: 93 EIHKALEKGKPVVEEMTRKIRKLDTYLDSMSVNCQLTEERIH 134
>SB_51565| Best HMM Match : MbeD_MobD (HMM E-Value=7.4)
Length = 141
Score = 25.8 bits (54), Expect = 5.6
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 180 GGRVRTISGNGCPFLP*RDQSSRIREAVLRRG 85
GG+ RT S NG F+ +DQ+S R LR G
Sbjct: 103 GGKSRTASINGHYFVLFKDQTSVSRAVRLRDG 134
>SB_26584| Best HMM Match : Peptidase_M3 (HMM E-Value=0)
Length = 851
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 104 SRILDD*SRHGRNGHPLPD 160
SR+L+ +RH R G PLP+
Sbjct: 402 SRVLNKFARHFRTGQPLPE 420
>SB_19321| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 780
Score = 25.8 bits (54), Expect = 5.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 125 INRPGFAKLFFDAASE 78
IN+PG ++ FDAASE
Sbjct: 4 INKPGKLRIIFDAASE 19
>SB_38114| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 146 HPLPDIVRTRPPQFVFARACC 208
HP P RPP F F R C
Sbjct: 109 HPPPTFGTLRPPLFTFDRVMC 129
>SB_28307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 25.4 bits (53), Expect = 7.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 96 EQLRESWTIDHVTGEMG 146
+QLR+SW +H TG G
Sbjct: 525 QQLRQSWGFEHRTGSPG 541
>SB_27422| Best HMM Match : Dynamin_N (HMM E-Value=3)
Length = 485
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 36 HEQVVDQLHRMLPLFASRVEEQLRESWTIDHVTGEMGTHCQIL 164
H QL R LPL EQL +W + T T Q+L
Sbjct: 183 HAVSTQQLGRGLPLVPDIRLEQLGRNWRVKPSTRRNATFLQVL 225
>SB_1333| Best HMM Match : IncA (HMM E-Value=0.32)
Length = 302
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 173 RPPQFVFARACCLYKDCALSPIRRIH 250
R P+FV R C L+ C +P R+H
Sbjct: 22 RRPRFVALRQCSLFNSCR-APHGRVH 46
>SB_49893| Best HMM Match : ATP-synt_ab (HMM E-Value=0)
Length = 313
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 57 LHRMLPLFASRVEEQLRESWTIDHVTGEMGT 149
LH L ASRV E+ E +T VTG+ G+
Sbjct: 93 LHSRLLERASRVSEEYVEKFTNGAVTGKTGS 123
>SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 140 NGHPLPDIVRTR 175
NG PLPD+VR R
Sbjct: 122 NGRPLPDVVRQR 133
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 142 WAPIARYCTDASTSVCICACMLSLQGLCIVT 234
W PI + AS++V + MLSL L +V+
Sbjct: 97 WGPITKTYATASSTVHVFTEMLSLFALVVVS 127
>SB_28841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 27 LSPHEQVVDQLHRMLPLFASRVEEQLRESWTIDH 128
L+ H+Q ++ M+P SRV E R+ ++ H
Sbjct: 5 LATHQQFDQEVPHMIPQLQSRVLETRRKLTSLQH 38
>SB_21192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 248 VSSEWVTMHNPCKDSMHAQIQTEVDASVQYLAMGA 144
V W+T NP +D + +++++ V A Y +GA
Sbjct: 182 VEPTWLTASNPREDRVGSELKSLVRAPPGYSLVGA 216
>SB_18926| Best HMM Match : Colipase_C (HMM E-Value=0.0043)
Length = 811
Score = 25.0 bits (52), Expect = 9.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -3
Query: 181 RWTRPYNIWQ 152
RW +PY++WQ
Sbjct: 567 RWVKPYDVWQ 576
>SB_5870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 153 CQILYGRVHLSLYLRVHAVFTRI 221
CQ+ YG+ L +HA + RI
Sbjct: 245 CQVFYGQTELVFAAPIHAKYIRI 267
>SB_43579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 173 RPPQFVFARACCLYKDCALSPIRRIH 250
R P+FV R C L+ C P R+H
Sbjct: 22 RRPRFVALRQCSLFNSCR-EPHGRVH 46
>SB_41915| Best HMM Match : F5_F8_type_C (HMM E-Value=9.1e-13)
Length = 317
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +1
Query: 118 RLITSREKWAPIARYCTDASTSVCICACMLSLQGLCIVTHSED 246
RL+T P S ++CICA L LCI D
Sbjct: 2 RLLTHIPDLFPDQAIVMVTSKALCICAFFTFLDQLCITADQHD 44
>SB_12693| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0014)
Length = 413
Score = 25.0 bits (52), Expect = 9.8
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 72 PLFASRVEEQLRESWTIDHVTGEMGTHCQILYGRVHLSLYLRVHAVFTRI 221
P + R+EE++ S I+H T G I+Y Y+ V+A F RI
Sbjct: 23 PFVSKRMEEEVTCSLCIEHFTDPRG---YIVYAPFTQECYI-VYAPFVRI 68
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,716,324
Number of Sequences: 59808
Number of extensions: 164334
Number of successful extensions: 524
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 16,821,457
effective HSP length: 61
effective length of database: 13,173,169
effective search space used: 302982887
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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