Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A12
         (255 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           20   4.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   4.1  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          20   5.5  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           20   5.5  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    19   7.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    19   7.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   7.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    19   9.6  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.2 bits (40), Expect = 4.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 223 TILVKTACTRKYKLRWTRPYNIWQW 149
           T + K + T+  KLR   PY  W+W
Sbjct: 215 TTVPKHSKTKSPKLR---PYPNWEW 236


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.2 bits (40), Expect = 4.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 235 G*QCTILVKTACTRKYKLRWTR 170
           G Q  +LVK   TR+Y L+  R
Sbjct: 127 GLQFDVLVKVDMTRQYLLQLIR 148


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 64  ACSLSSLAASKNSFANPGRLITSREKW 144
           +C L    +  + F    RLIT  EKW
Sbjct: 11  SCDLLKKRSENDPFLK--RLITGDEKW 35


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 135 GEMGTHCQILYGRVHLSLY 191
           G++G HC      V +SLY
Sbjct: 83  GKVGVHCMKTTQAVVVSLY 101


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 253 QMYPPNG*QCTILVKTACTRKYKLR 179
           Q+YP +   C I +++    K KLR
Sbjct: 121 QLYPMDIQICPIYIESFSYHKQKLR 145


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 169 DASTSVCICACMLSLQGLCIV 231
           DA  SVC     ++L   C+V
Sbjct: 308 DAFMSVCTVFVFMALMEYCLV 328


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.4 bits (38), Expect = 7.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 212 KDSMHAQIQTEVDASVQYL 156
           KDS + + QTE D    YL
Sbjct: 684 KDSQYIREQTESDDKEGYL 702


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 118 RLITSREKW 144
           RLIT  EKW
Sbjct: 148 RLITGDEKW 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,883
Number of Sequences: 438
Number of extensions: 1629
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4511484
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)