Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A11
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    25   0.61 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   3.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   9.9  

>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 453 GYYLQEIPIIVNVFPLPVCPYAKTQA 376
           GYY +E P+     P  V PY K +A
Sbjct: 25  GYYHEEPPLFYEERPDFVAPYIKVEA 50


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 203 TVKNSKEQNDGSREKYKDFTFDHSY 277
           +V  SK  +DG R  Y + TF H +
Sbjct: 486 SVACSKTVSDGIRHYYVNVTFPHLF 510


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 385 DASIVSLESAINNVQAEVCE 326
           DA +   ES+++N + E CE
Sbjct: 485 DAKMFCNESSVSNCENEYCE 504


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 374 NACVFAYGQTGSGKTFTM 427
           N C   + + G+ K FTM
Sbjct: 691 NPCTTCFCENGNNKCFTM 708


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 480 TEGVNNWRIGYYLQE 436
           T+ +NN  +G+++QE
Sbjct: 159 TQSMNNHHMGHHMQE 173


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 480 TEGVNNWRIGYYLQE 436
           T+ +NN  +G+++QE
Sbjct: 161 TQSMNNHHMGHHMQE 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,153
Number of Sequences: 336
Number of extensions: 3079
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)