Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_A11
(575 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 66 3e-12
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 63 2e-11
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 58 1e-09
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 56 4e-09
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 53 3e-08
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 49 4e-07
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 49 6e-07
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 44 1e-05
SPAC12B10.04 |||tubulin-tyrosine ligase |Schizosaccharomyces pom... 28 1.1
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 27 1.5
SPBC776.06c |||spindle pole body interacting protein |Schizosacc... 27 1.5
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 27 2.6
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 26 3.4
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 6.0
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 25 6.0
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 25 7.9
SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po... 25 7.9
SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.9
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 25 7.9
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 25 7.9
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 66.5 bits (155), Expect = 3e-12
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Frame = +2
Query: 89 VTMASVKVAVRVRPFNQREKDMSAKLIVQMENKKTRLLTVKNSKEQNDGSREKYK----- 253
++ A+V+V VRVRP + RE SA+ ++ +++ + +T+ K SR K +
Sbjct: 1 MSTANVRVIVRVRPKSLRELSKSAEDLLSVDSHN-KTVTITPPKHGLKHSRHKNRVNGPR 59
Query: 254 DFTFDHSYWSFDNDDAHYASQEQVFADLGLDVIDSAFEGYNACVFAYGQTGSGKTFTMMG 433
F FD + + + + QE V+ G ++ S EG+N+C YGQ G+GKT++++G
Sbjct: 60 TFAFDECFAPSAPESKNLSGQEDVYESTGPLLVKSILEGFNSCFITYGQKGTGKTYSVVG 119
Query: 434 I 436
+
Sbjct: 120 L 120
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 63.3 bits (147), Expect = 2e-11
Identities = 42/114 (36%), Positives = 58/114 (50%)
Frame = +2
Query: 95 MASVKVAVRVRPFNQREKDMSAKLIVQMENKKTRLLTVKNSKEQNDGSREKYKDFTFDHS 274
M S+KV R+RP NQ E+D+ ++ N T + E +D S +F FD
Sbjct: 1 MTSIKVVCRIRPTNQLEQDLGGNNVIYPLNDSTVHI------ETSDYS----GNFVFDRV 50
Query: 275 YWSFDNDDAHYASQEQVFADLGLDVIDSAFEGYNACVFAYGQTGSGKTFTMMGI 436
+ ++Q +F+ +D F GYN V AYGQTGSGKT+TMMGI
Sbjct: 51 FHP-------SSTQNDIFSYSIESTVDDLFLGYNGTVLAYGQTGSGKTYTMMGI 97
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 57.6 bits (133), Expect = 1e-09
Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +2
Query: 260 TFDHSY-WSFDNDDAHYASQEQVFADLGLDVIDSAFEGYNACVFAYGQTGSGKTFTM 427
T+D +Y +SFD A + VF ++ +I SA +GYN +FAYGQTGSGKT+TM
Sbjct: 530 TYDRNYEFSFDRVFAPESDNSSVFEEIS-QLIQSAIDGYNVSIFAYGQTGSGKTYTM 585
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 56.0 bits (129), Expect = 4e-09
Identities = 36/109 (33%), Positives = 55/109 (50%)
Frame = +2
Query: 101 SVKVAVRVRPFNQREKDMSAKLIVQMENKKTRLLTVKNSKEQNDGSREKYKDFTFDHSYW 280
+++V RVRP SA++ +N + + + + + K + F+
Sbjct: 473 NIRVFCRVRP--PLGDGESAQIAFPDQNSEASTIEIVAQAPGSSLTGNGIKQYAFN---- 526
Query: 281 SFDNDDAHYASQEQVFADLGLDVIDSAFEGYNACVFAYGQTGSGKTFTM 427
FD + + E VF +L +I SA +GYN C+FAYGQTGSGKT TM
Sbjct: 527 -FDRVFSPETTNEDVFNELS-QLIQSAMDGYNVCIFAYGQTGSGKTHTM 573
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 52.8 bits (121), Expect = 3e-08
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +2
Query: 278 WSFDNDDAHYASQEQVFADLGLDVIDSAFEGYNACVFAYGQTGSGKTFTMMG 433
++FD ASQE V+ ++DS +GYNA VFAYG TG GKT T+ G
Sbjct: 95 YAFDRLFGEEASQEDVYKGTTEPLLDSVLQGYNATVFAYGATGCGKTHTISG 146
Score = 31.9 bits (69), Expect = 0.069
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +2
Query: 98 ASVKVAVRVRPFNQREKDMSAKLIVQMENKKTRLLTVKNS 217
+S+ VAVRVRPF +REK + A+ E L V N+
Sbjct: 5 SSISVAVRVRPFTEREKGLLAETPKSKEFLGDGSLAVSNT 44
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 49.2 bits (112), Expect = 4e-07
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +2
Query: 278 WSFDNDDAHYASQEQVFADLGLDVIDSAFEGYNACVFAYGQTGSGKTFTMMG 433
++FD A+Q+QV+ ++D+ +G+NA +FAYG TG GKT T+ G
Sbjct: 105 YAFDRVFDETATQQQVYERTARPLLDNILDGFNATIFAYGATGCGKTHTISG 156
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 48.8 bits (111), Expect = 6e-07
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +2
Query: 278 WSFDNDDAHYASQEQVFADLGLDVIDSAFEGYNACVFAYGQTGSGKTFTMMG 433
++FD A Q +F + +++ GYN +FAYGQTG+GKT+TM G
Sbjct: 120 YAFDKVFGPEADQLMLFENSVAPMLEQVLNGYNCTIFAYGQTGTGKTYTMSG 171
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 44.4 bits (100), Expect = 1e-05
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +2
Query: 347 VIDSAFEGYNACVFAYGQTGSGKTFTMMG 433
V+ + F GYN VFAYG TG+GKT++M G
Sbjct: 202 VVRNVFSGYNGIVFAYGMTGTGKTYSMQG 230
>SPAC12B10.04 |||tubulin-tyrosine ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 403
Score = 27.9 bits (59), Expect = 1.1
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 95 MASVKVAVRVRPFNQREKDMSAKLIVQMENKKTRLLTVKNSKEQNDGSREKYKDFTFDHS 274
M+S K ++V N R++ K+I ++N L ++KE N +Y+D FD
Sbjct: 1 MSSTKKDIKVY-VNYRDEYAEPKIISALKNSGKELTFTNSAKEANF-QWAQYEDIDFDEV 58
Query: 275 Y 277
Y
Sbjct: 59 Y 59
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 311 SQEQVFADLGLDVI-DSAFEGYNACVFAYGQTGSGKTFTMMGIS 439
+Q VF+ + +I DS + +F G +G+GKT+T+ G S
Sbjct: 65 TQLDVFSTICAPLIADSLVNMNDTLLFTLGVSGAGKTYTLFGPS 108
>SPBC776.06c |||spindle pole body interacting protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 27.5 bits (58), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 248 YKDFTFDHSYWSFDNDD 298
YKD+ F WS+DNDD
Sbjct: 456 YKDYKFKGFGWSWDNDD 472
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 26.6 bits (56), Expect = 2.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 392 YGQTGSGKTFTMMGISCK*YPIRQLFTPSVMNKK 493
YG G+GKT T++ +S R+LF P +M +
Sbjct: 58 YGSPGTGKTSTILALS------RELFGPQLMKSR 85
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 26.2 bits (55), Expect = 3.4
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 97 GLGESGREGSPVQSKRKGHERETHRSDGEQENETSHSQK 213
G GES E ++S E + S + ++ SH+Q+
Sbjct: 75 GFGESASENDELESAESEAENDEESSSQKSNSKESHAQR 113
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 25.4 bits (53), Expect = 6.0
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 137 QREKDMSAKLIVQMENKKTRLLTVKNSKEQNDGSREKYKDF 259
+REKD+ +L+ E++K+ E N+ ++K+F
Sbjct: 235 KREKDLENRLLKVEEHEKSLNERATKLSEANENFNNRFKEF 275
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 25.4 bits (53), Expect = 6.0
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 277 VRVVERKVFVLL-PAAIVLFFAIFDCEKSRFLVLHLNDEFRAHVLFSLIE 131
+RVV ++ + L+ P +L AIF C ++ + + L E LF L+E
Sbjct: 2550 IRVVSKENYSLIKPHISILAPAIFGCVRAIVIPVKLAAEAAFLALFQLVE 2599
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 25.0 bits (52), Expect = 7.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 537 YIGVQSHKSKEKSFFFLFITE 475
YI V SH KEKS LF+ +
Sbjct: 134 YIRVLSHNKKEKSLDHLFLAQ 154
>SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 433
Score = 25.0 bits (52), Expect = 7.9
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 233 GSREKYKDFTFDHSYWSFDNDDAHYASQEQ 322
G K+K F +HS D +D H + Q +
Sbjct: 177 GKAGKFKKFVVNHSETDIDKNDNHVSVQTE 206
>SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 575
Score = 25.0 bits (52), Expect = 7.9
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3
Query: 285 KDQYEWSNVKSLYFSRLPSFCSLLFLTVRSLVFLFSI*TMSFALMSF 145
K QY SNV L R S C + LT+ + +LFS S++ + F
Sbjct: 271 KSQYRKSNV--LAADR--SLCEYIILTLFHMEYLFSFVASSWSTLDF 313
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 25.0 bits (52), Expect = 7.9
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -3
Query: 483 ITEGVNNWRIGYYLQEIPIIVNVFPLPVCPYAK 385
ITE N + ++L+ +P+ N F Y+K
Sbjct: 163 ITEASNEYVYSFHLEYVPLESNTFSASALEYSK 195
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 25.0 bits (52), Expect = 7.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 374 NACVFAYGQTGSGKTFTMMG 433
N CV G GSGK+ M+G
Sbjct: 2513 NRCVIFCGPPGSGKSMLMLG 2532
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,400,354
Number of Sequences: 5004
Number of extensions: 48879
Number of successful extensions: 171
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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