Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A11
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   2.3  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   3.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   5.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   9.4  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = +1

Query: 97   GLGESGREGS--PVQSKRKGHERETHRSDG 180
            G G  G EGS  P + KRKG E++  +S G
Sbjct: 922  GGGSGGEEGSGAPKERKRKG-EKKPRKSQG 950



 Score = 23.0 bits (47), Expect = 7.1
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +1

Query: 106  ESGRE-GSPVQSKRKGHERETHRSDGEQENETSHSQ 210
            ESG E G+P   +++    +   SDG Q    S S+
Sbjct: 1035 ESGGESGAPATKRKRRIASDEEDSDGSQRRSRSRSR 1070


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 136 SKRKGHERETHRSDGEQENETS 201
           S++K H+R     DG+Q+N  S
Sbjct: 843 SEKKHHKRSKRVKDGKQQNHVS 864


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +2

Query: 257 FTFDHSYWSFDNDDAHYASQEQVFADLGLDVIDSAF 364
           F  + SY++ DN   H+    ++    G+D+  + F
Sbjct: 178 FRDNSSYYTIDNKRVHFKEVSKLLKQHGIDLDHNRF 213


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 353  DSAFEGYNACVFAYGQTG 406
            D++ EGY ACV+     G
Sbjct: 1051 DASEEGYGACVYVRSTNG 1068


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,733
Number of Sequences: 2352
Number of extensions: 11977
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)