Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A10
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    28   0.19 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.58 
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.4  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 28.3 bits (60), Expect = 0.19
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -2

Query: 369 RSSSENCVRNSVKSLPRPEHII--RAPSNLKTAHSVGEASDL 250
           RSSS NC   + KS   P+H +  R+PS  +   S+ + +++
Sbjct: 355 RSSSANCSSAAPKSTAHPDHFLDHRSPSPQRGNQSLSQMTEI 396


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.6 bits (56), Expect = 0.58
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
 Frame = +2

Query: 248  VRSDASPTEWAVFKFEGARIICSGRGSDFTEFRTQFSDDERAFGYLRLQMGDEMSKRKKF 427
            VR D      + + +    +  S  G+ F   +    D+E+ FG+             K 
Sbjct: 1211 VRLDQDELRTSSYNYHPRDVHLSSEGAMFYRVKVAPGDNEKRFGWYEQATNSSTGATTKK 1270

Query: 428  MFVTWVGPNVSVINRAKMSTDK-AIIKDL 511
             F    G +V+V  + K  +++ A +KDL
Sbjct: 1271 SFAA-DGTDVTVREKPKQESNRDADVKDL 1298


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 112 ITVIFYYCESNVG 150
           IT+++YY + NVG
Sbjct: 83  ITIVYYYVKPNVG 95


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -3

Query: 347 YGTL*SHFHVPSILYG 300
           YG    HFHVPS LYG
Sbjct: 767 YGKDNPHFHVPS-LYG 781


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,622
Number of Sequences: 2352
Number of extensions: 13025
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)