Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A10
         (577 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    24   0.94 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   3.8  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   3.8  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    22   3.8  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    22   3.8  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   6.6  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    21   6.6  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   8.7  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
 Frame = +2

Query: 236 AYEDVRSDASPTEWAVFKFEGARIICSGRGSDFTE-----FRTQFSDDERAFGYLRLQM 397
           A ED  S     E A    +  R +CS +     E     FR +F  DER   Y++  M
Sbjct: 18  AIEDTMSKKMTIEEAKKTIKNLRKVCSKKNDTPKELLDGQFRGEFPQDERLMCYMKCIM 76


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = +2

Query: 281 VFKFEGARIICSGRGSDFTEFRTQFSDDERAFGYLRLQM 397
           V K+ G  +IC    +      T+ + D+R+    R++M
Sbjct: 282 VCKWPGCEVICEDYQAFLKHLNTEHTLDDRSTAQARVRM 320


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 261 ASDLTSSYAAXXXXXXXXXXXVTFLGPFCTIVSYSK 154
           A DLT +YA            +  LG +C +  Y++
Sbjct: 185 ALDLTPTYAVVSSSISFYVPCIVMLGIYCRLYCYAQ 220


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 116 VICTVFYFYKFFGIFTS 66
           V+C +  F++ FG++ S
Sbjct: 109 VMCRIMAFFRMFGLYLS 125


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 194 VTMTTGIDRDTIRAAY-EDVRSDASP 268
           +T+  GID+DT+ A Y E +  D  P
Sbjct: 14  LTVVRGIDQDTVVAKYMEYLMPDIMP 39


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = +2

Query: 194 VTMTTGIDRDTIRAAY-EDVRSDASP 268
           +T+  GID+DT+ A Y E +  D  P
Sbjct: 14  LTVVRGIDQDTVVAKYMEYLMPDIMP 39


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 460 RHVRSDPRYEHEFLAFRHLVAHLQPQVTE 374
           R  R   +   E++A+R L   ++ ++TE
Sbjct: 386 RQYREKVKQVEEYMAYRKLPREMRQRITE 414


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -1

Query: 460 RHVRSDPRYEHEFLAFRHLVAHLQPQVTE 374
           R  R   +   E++A+R L   ++ ++TE
Sbjct: 354 RQYREKVKQVEEYMAYRKLPREMRQRITE 382


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 338 EFRTQFSDDERAFGYLRLQM 397
           +FR +F  DER   Y++  M
Sbjct: 31  QFRGEFPQDERLMCYMKCIM 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,094
Number of Sequences: 438
Number of extensions: 3899
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)