Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A07
         (578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    26   0.31 
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   2.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   3.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.8  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   8.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   8.8  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.8  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -2

Query: 511 RTPFHRCQS*SCKEYRSQAF*GSKFVVYAAQR 416
           RTP     S +CK+ +  A  GS+F +Y A +
Sbjct: 569 RTPSVMSASSTCKKDKKNAGSGSRFTIYKANK 600


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 24  NVTKTTGLHIGPKFVSVTQNVHNNEVVKDLPLPRYLW 134
           N+T+   ++ G  FV +      N+++K     R++W
Sbjct: 47  NMTEKVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIW 83


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 406 IICAAELRTLQTYFLRTLGYDIPYN 480
           I+   E++ + TY ++   +D+ YN
Sbjct: 249 ILAKKEIKGVPTYLIKWKNWDLKYN 273


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +2

Query: 173 VCRCSCSINHMCRSHCLLHY 232
           +C  S   NH+ + H + HY
Sbjct: 236 ICGKSFGYNHVLKLHQVAHY 255


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 143 EEFKQS*KIIVCRCSC 190
           ++F+ + K I+C+C C
Sbjct: 67  KDFRFAFKSIICKCFC 82


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 143 EEFKQS*KIIVCRCSC 190
           ++F+ + K I+C+C C
Sbjct: 515 KDFRFAFKSIICKCFC 530


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +1

Query: 367 IVQHTVSQECDRFIICAAELRTLQTYF 447
           +VQH    E +   +C A    ++ +F
Sbjct: 180 VVQHQSGSEAEAEFVCIATPEAIELHF 206


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,691
Number of Sequences: 438
Number of extensions: 4029
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)