Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A06
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.6  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.5  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   4.6  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   4.6  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   4.6  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.1  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 410 VDIHSSSLFSYIRLNLVAMIGHHLRPLLLITSLWAIH 300
           V I+   L ++IRL +V M  + +RP ++   L   H
Sbjct: 48  VFINGRPLPNHIRLKIVEMAANGIRPCVISRQLRVSH 84


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
          beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 42 PGLQARVLFFFSLNKHLYF 98
          PG   RVLFFFS    L+F
Sbjct: 3  PGELKRVLFFFSFCCILFF 21


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +2

Query: 308 PTSLLSITKASNGVR--SWLLDSNGYTKTKNWNGYPPSVPLGNINLFGMHSKPSDIYDGT 481
           PT      K +N  R  S  L +N YT +K     P   P+ ++  +   ++ +++   T
Sbjct: 442 PTKPYYKLKTANNKRPPSTELGTNIYTSSKRQRTSPQLSPMSSLPPYPNRTQITEVTQQT 501

Query: 482 FPSV 493
            PS+
Sbjct: 502 EPSI 505


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 231  YTKTSLKNILGVHAPPHTP 287
            Y + S+ + L V+APPH P
Sbjct: 1382 YGQDSVTHQLIVNAPPHAP 1400


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 97  SVNFLTSLTFVHSHQP 144
           +V+FLT L  +H +QP
Sbjct: 94  AVDFLTILNSMHKYQP 109


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 274 PPTLRSPVQWI 306
           PP  RSP +WI
Sbjct: 117 PPPARSPYEWI 127


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 274 PPTLRSPVQWI 306
           PP  RSP +WI
Sbjct: 117 PPPARSPYEWI 127


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 368 SNGYTKTKNWNGYPPSVPLGNI 433
           SNGY+   +   Y P  P G I
Sbjct: 132 SNGYSSPMSSGSYDPYSPNGKI 153


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 197 VEFVRKVLAFGV 232
           +EF+RKVL F V
Sbjct: 466 IEFIRKVLEFDV 477


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,551
Number of Sequences: 336
Number of extensions: 3628
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)