Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A05
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   4.2  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   4.2  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    23   7.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.4  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   9.8  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 17/71 (23%), Positives = 37/71 (52%)
 Frame = +3

Query: 246 IGQMFSGSFICWDIYKQRSTRGIGLMPFLGGIVMSVLNLKYGYILRDDTMIQVNLSGLAL 425
           + Q+ S   I  + YK + +   G++  + G+ MSV+N  + +  +    I + L  L  
Sbjct: 518 VWQLASNKIIFLNSYKMKLSIIFGVVHMIFGVCMSVVN--HNFFKK---RISIVLEFLP- 571

Query: 426 NIVYMLIYYAY 458
            I+++++ +AY
Sbjct: 572 QIIFLVLLFAY 582


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 499 ASPIWAHTFTFS 464
           ASPIW HT  F+
Sbjct: 769 ASPIWCHTLRFA 780


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 87  REFYCLPQLCQRNSSLSKTFTPVFVYKV 170
           +E  C+P+    N  LSKT T +   ++
Sbjct: 81  KEGKCIPKCSNENMPLSKTSTAILFVRL 108


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
 Frame = +3

Query: 255 MFSGSFICWDIY---KQRSTRGIGLMPFLGGIVMSVLNLKYGYILR 383
           + +G F  W      ++   +GI L+  + G+ + VLN+   +  R
Sbjct: 117 LLAGDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTFR 162


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 277 AGTYTSNAARGVSVSCRSS 333
           +G  T  +AR  SV CRSS
Sbjct: 35  SGMSTRASARSASVDCRSS 53


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,064
Number of Sequences: 2352
Number of extensions: 14403
Number of successful extensions: 248
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)