BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_A04
(523 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC... 212 2e-55
AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA... 212 2e-55
AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB... 199 2e-51
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro... 31 0.72
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P... 31 0.72
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P... 31 0.72
>AE013599-1421|AAM71028.1| 155|Drosophila melanogaster CG8857-PC,
isoform C protein.
Length = 155
Score = 212 bits (518), Expect = 2e-55
Identities = 105/137 (76%), Positives = 119/137 (86%), Gaps = 4/137 (2%)
Frame = +3
Query: 36 QRKRS-QKQATVFLNRK---GGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNV 203
Q +R+ QKQ V LNRK G K+K +R S++VGLGFKTPREA++GTYIDKKCP+TG+V
Sbjct: 4 QNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 63
Query: 204 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 383
IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIV
Sbjct: 64 RIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIV 123
Query: 384 TIGECRPLSKTVRFNVL 434
TIGECRPLSKTVRFNVL
Sbjct: 124 TIGECRPLSKTVRFNVL 140
>AE013599-1420|AAF58552.1| 155|Drosophila melanogaster CG8857-PA,
isoform A protein.
Length = 155
Score = 212 bits (518), Expect = 2e-55
Identities = 105/137 (76%), Positives = 119/137 (86%), Gaps = 4/137 (2%)
Frame = +3
Query: 36 QRKRS-QKQATVFLNRK---GGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNV 203
Q +R+ QKQ V LNRK G K+K +R S++VGLGFKTPREA++GTYIDKKCP+TG+V
Sbjct: 4 QNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 63
Query: 204 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 383
IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIV
Sbjct: 64 RIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIV 123
Query: 384 TIGECRPLSKTVRFNVL 434
TIGECRPLSKTVRFNVL
Sbjct: 124 TIGECRPLSKTVRFNVL 140
>AE013599-1422|AAM71029.1| 154|Drosophila melanogaster CG8857-PB,
isoform B protein.
Length = 154
Score = 199 bits (486), Expect = 2e-51
Identities = 93/133 (69%), Positives = 109/133 (81%)
Frame = +3
Query: 36 QRKRSQKQATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAVEGTYIDKKCPFTGNVSIRG 215
+R ++ A V + RK +K R + +GLGF+ P EA++GTYIDKKCP+TG+V IRG
Sbjct: 7 ERSFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTGDVRIRG 66
Query: 216 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 395
RILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GDIVTIGE
Sbjct: 67 RILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIVTIGE 126
Query: 396 CRPLSKTVRFNVL 434
CRPLSKTVRFNVL
Sbjct: 127 CRPLSKTVRFNVL 139
>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 204 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 344
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
isoform B protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 204 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 344
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
isoform A protein.
Length = 1188
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 204 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 344
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,967,290
Number of Sequences: 53049
Number of extensions: 532952
Number of successful extensions: 1148
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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