Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A03
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   0.81 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   5.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.7  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   5.7  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   7.5  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +1

Query: 58   SHKLNSRNDHIHNGEGTATENRRAPPPP 141
            SH       H++        NRR PPPP
Sbjct: 1678 SHSTWDPRRHMYEELNHCAPNRRCPPPP 1705


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 118 SRWRFLLHCV 89
           ++WRFLL C+
Sbjct: 68  NKWRFLLQCL 77



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 77  GTTIYTMEKEPPPRIGVHRHRLMYLLR 157
           GTT  T E++P P   V  H +  L +
Sbjct: 110 GTTNLTFEEDPEPFGRVRDHNISALCK 136


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = +1

Query: 118 NRRAPPPPYVSVEAQPVNVGXTRPASITTPT 210
           N  A  P Y+S  A        RPAS T  T
Sbjct: 821 NSPASSPRYLSAAATSSTSTSPRPASSTAAT 851


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -1

Query: 129 CTPILGGGSFSIVY 88
           C   LG G F IVY
Sbjct: 69  CGTFLGSGGFGIVY 82


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 381 IFCSILMIFLALHLIFT 431
           I C I ++FLAL+   T
Sbjct: 7   ILCGIAVLFLALYYYLT 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,659
Number of Sequences: 438
Number of extensions: 3414
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)