Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_A01
(262 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4
SB_48122| Best HMM Match : PKD_channel (HMM E-Value=0) 27 1.8
SB_28698| Best HMM Match : TPR_2 (HMM E-Value=0.00019) 27 1.8
SB_44915| Best HMM Match : VWA (HMM E-Value=0) 27 2.4
SB_13163| Best HMM Match : VWA (HMM E-Value=2.3e-32) 27 2.4
SB_7134| Best HMM Match : HMG_box (HMM E-Value=2e-16) 27 2.4
SB_49511| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.4
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 27 2.4
SB_20469| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.2
SB_49711| Best HMM Match : SWIM (HMM E-Value=0.068) 26 4.2
SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.5
SB_51629| Best HMM Match : NUMOD3 (HMM E-Value=9.8) 25 7.3
SB_22138| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.3
SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007) 25 7.3
SB_54002| Best HMM Match : POP1 (HMM E-Value=0) 25 7.3
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_48207| Best HMM Match : Peptidase_C5 (HMM E-Value=0.33) 25 9.7
SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_30667| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_27800| Best HMM Match : CAP_GLY (HMM E-Value=2.5e-39) 25 9.7
SB_16986| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_11066| Best HMM Match : PA14 (HMM E-Value=7.8) 25 9.7
SB_4194| Best HMM Match : Gal_Lectin (HMM E-Value=3.4e-18) 25 9.7
SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.7
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 25 9.7
SB_29298| Best HMM Match : GFO_IDH_MocA_C (HMM E-Value=2.3e-06) 25 9.7
SB_11200| Best HMM Match : DUF1518 (HMM E-Value=8.8) 25 9.7
SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1) 25 9.7
SB_9080| Best HMM Match : zf-CXXC (HMM E-Value=2) 25 9.7
>SB_20776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = +2
Query: 74 NPDY-NPGQVHVVDNSGVP-SDG-NSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFV 241
NP+Y NPG + + + S G + H I NP P++ G +P TGP +
Sbjct: 20 NPEYKNPGNKNGIRHPREENSHGIRNSHTRIRNPKPYWKTCHGAIRGIQQPDCTGPEMI 78
>SB_48122| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1589
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 30 YWPW--LPQTECTWSIITLIIIQARFTWWTIVVFHRTAIV 143
YW W L + C+W+ I L ++ T++ +H+ V
Sbjct: 1296 YWSWVELVLSGCSWTSIVLYFVRFGINKSTVLTYHKDTSV 1335
>SB_28698| Best HMM Match : TPR_2 (HMM E-Value=0.00019)
Length = 261
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 59 HVVDHNPDYNPGQVHVVDNSGVPS 130
+V+D NP ++P ++H+ D GVPS
Sbjct: 183 NVLDLNPSFHPAEIHLRD-IGVPS 205
>SB_44915| Best HMM Match : VWA (HMM E-Value=0)
Length = 541
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 152 VIANPDPFFSQP-SNGPSGNYEPISTG 229
VIA PDP S+P +NG G PIS+G
Sbjct: 258 VIAEPDPCLSKPCANG--GTCSPISSG 282
>SB_13163| Best HMM Match : VWA (HMM E-Value=2.3e-32)
Length = 318
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 152 VIANPDPFFSQP-SNGPSGNYEPISTG 229
VIA PDP S+P +NG G PIS+G
Sbjct: 54 VIAEPDPCLSKPCANG--GTCSPISSG 78
>SB_7134| Best HMM Match : HMG_box (HMM E-Value=2e-16)
Length = 228
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 89 PGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQ 184
P VD+SGV D S +V A +P FSQ
Sbjct: 155 PLHSEAVDSSGVAGDQRSSLLVSATLNPLFSQ 186
>SB_49511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 89 PGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQ 184
P VD+SGV D S +V A +P FSQ
Sbjct: 84 PLHSEAVDSSGVAGDQRSSLLVSATLNPLFSQ 115
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 152 VIANPDPFFSQP-SNGPSGNYEPISTG 229
VIA PDP S+P +NG G PIS+G
Sbjct: 409 VIAEPDPCLSKPCANG--GTCSPISSG 433
>SB_20469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 50 LRQPWPIRRRRKTRK 6
LR+P P+RRRRK +K
Sbjct: 513 LRKPLPLRRRRKLKK 527
>SB_49711| Best HMM Match : SWIM (HMM E-Value=0.068)
Length = 245
Score = 26.2 bits (55), Expect = 4.2
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -3
Query: 50 LRQPWPIRRRRKTRK 6
LR+P P+RRRRK +K
Sbjct: 207 LRKPLPLRRRRKLKK 221
>SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 794
Score = 25.8 bits (54), Expect = 5.5
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 NRVHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPIS-T 226
N ++ V H PD +P VH DN N+ H P + P N PS + P +
Sbjct: 618 NHLNTV-HTPDNHPSNVHTPDN-----HLNTVHTPDNQPSTVHT-PDNQPSNVHTPDNHL 670
Query: 227 GPAFVDFNHPN 259
NHP+
Sbjct: 671 NTVHTPDNHPS 681
>SB_51629| Best HMM Match : NUMOD3 (HMM E-Value=9.8)
Length = 337
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = +2
Query: 62 VVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFV 241
+V H+ + Q V G+P + + PDP +P P N E ++ +
Sbjct: 182 LVKHSNEMFRTQRSRVKTKGLPKNSEENAENDQQPDPLSKEPFPAPLNNPEKVTQTEPVI 241
Query: 242 D 244
D
Sbjct: 242 D 242
>SB_22138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1047
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 36 PWLPQTECTWSIITL 80
P+ P+T+CTW IITL
Sbjct: 85 PYPPETDCTW-IITL 98
>SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007)
Length = 831
Score = 25.4 bits (53), Expect = 7.3
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +2
Query: 80 DYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPS--NGPSGNYEPISTGPAFVDF 247
DY G+V +S PS + + + +N + +PS N PSG + S + DF
Sbjct: 280 DYGLGKVQSSKDSHSPSVNSEEGLYFSNGKCYVGKPSPENKPSGKAQNPSMDKSEEDF 337
>SB_54002| Best HMM Match : POP1 (HMM E-Value=0)
Length = 886
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 107 VDNSGVPSDGNSDHVVIANPDPFFSQPSNG 196
VDN D NSD V + + F ++PS G
Sbjct: 375 VDNKPSKKDSNSDRVKVDSDFEFVAKPSCG 404
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 122 VPSDGNSDHVVIANPDP 172
+P DGN D I N DP
Sbjct: 33 IPEDGNGDAAYIVNVDP 49
>SB_48207| Best HMM Match : Peptidase_C5 (HMM E-Value=0.33)
Length = 184
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 122 VPSDGNSDHVVIANPDP 172
+P DGN D I N DP
Sbjct: 33 IPEDGNGDAAYIVNVDP 49
>SB_33238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 62 VVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPD 169
V+DH N V+D+ V DG+SD V+ N D
Sbjct: 173 VIDHVDVINDDDSDVIDDVDVNDDGDSD-VIDDNDD 207
>SB_30667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 122 VPSDGNSDHVVIANPDP 172
+P DGN D I N DP
Sbjct: 33 IPEDGNGDAAYIVNVDP 49
>SB_27800| Best HMM Match : CAP_GLY (HMM E-Value=2.5e-39)
Length = 246
Score = 25.0 bits (52), Expect = 9.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 53 RVHVVDHNPDYNPGQ 97
R+HV+D P PGQ
Sbjct: 83 RIHVIDRTPGVKPGQ 97
>SB_16986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 615
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +2
Query: 74 NPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPIST 226
+P Y PG S + G++ H + P S P S ++ P ST
Sbjct: 163 HPSYTPGSTPHTPGSTPHTPGSTPHTQESTPHSPESTPHTPESTSHTPEST 213
>SB_11066| Best HMM Match : PA14 (HMM E-Value=7.8)
Length = 257
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +2
Query: 86 NPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNG 196
NPG + ++D+ V +D + D ++ +++ +NG
Sbjct: 122 NPGDIIIIDSKDVDNDDSEDLGYMSEIVRYYNSRNNG 158
>SB_4194| Best HMM Match : Gal_Lectin (HMM E-Value=3.4e-18)
Length = 368
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +2
Query: 86 NPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNG 196
NPG + ++D+ V +D + D ++ +++ +NG
Sbjct: 233 NPGDIIIIDSKDVDNDDSEDLGYMSEIVRYYNSRNNG 269
>SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/48 (25%), Positives = 20/48 (41%)
Frame = +2
Query: 77 PDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPI 220
P Y G + + G + +V+ P PF S P G + + + I
Sbjct: 747 PQYGSGAMTSSSGPFIQPQGMTGNVMRPQPPPFQSTPQGGSANDLKDI 794
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 122 VPSDGNSDHVVIANPDP 172
+P DGN D I N DP
Sbjct: 1217 IPEDGNGDAAYIVNVDP 1233
>SB_29298| Best HMM Match : GFO_IDH_MocA_C (HMM E-Value=2.3e-06)
Length = 805
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 116 YCPPREPGLDYNQGYDRPRALCLRQP 39
+ PP PG QG+DR + CL QP
Sbjct: 113 FAPPLTPGESEVQGFDRLLS-CLGQP 137
>SB_11200| Best HMM Match : DUF1518 (HMM E-Value=8.8)
Length = 372
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 142 TIAVRWNTTIVHHVNLAWIIIRVMIDHVHSVCGSH 38
TI + I+ + + III ++I+H H+ C H
Sbjct: 176 TIIINIIINIIIIITITIIIIIIIINHEHNPCHHH 210
>SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1)
Length = 245
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 122 VPSDGNSDHVVIANPDP 172
+P DGN D I N DP
Sbjct: 33 IPEDGNGDAAYIVNVDP 49
>SB_9080| Best HMM Match : zf-CXXC (HMM E-Value=2)
Length = 390
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3
Query: 83 NQGYDRPRALCLRQPWPIRRRRKTR 9
N+GY PR CLR+ RK +
Sbjct: 47 NKGYSNPRHRCLRECTCFENHRKVK 71
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,220,664
Number of Sequences: 59808
Number of extensions: 202956
Number of successful extensions: 592
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 16,821,457
effective HSP length: 63
effective length of database: 13,053,553
effective search space used: 300231719
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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