SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_A01
         (262 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC103660-1|AAI03661.1|  544|Homo sapiens RBM15 protein protein.        29   3.6  
BC103507-1|AAI03508.1|  969|Homo sapiens RBM15 protein protein.        29   3.6  
BC103493-1|AAI03494.1|  969|Homo sapiens RBM15 protein protein.        29   3.6  
BC098140-1|AAH98140.1|  969|Homo sapiens RBM15 protein protein.        29   3.6  
BC062316-1|AAH62316.1|  957|Homo sapiens RBM15 protein protein.        29   3.6  
BC047479-1|AAH47479.1|  959|Homo sapiens RBM15 protein protein.        29   3.6  
BC006397-1|AAH06397.2|  957|Homo sapiens RBM15 protein protein.        29   3.6  
AL355488-1|CAI19077.1|  977|Homo sapiens RNA binding motif prote...    29   3.6  
AK025596-1|BAB15185.1|  532|Homo sapiens protein ( Homo sapiens ...    29   3.6  
AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.              29   3.6  
AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.              29   3.6  
AJ297259-2|CAC38862.1|  969|Homo sapiens one twenty two protein ...    29   3.6  
AJ297259-1|CAC38861.1|  957|Homo sapiens one twenty two protein ...    29   3.6  
AB209680-1|BAD92917.1|  316|Homo sapiens RNA binding motif prote...    29   3.6  
AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or...    28   4.7  
AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or...    28   4.7  
AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or...    28   4.7  
AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or...    28   4.7  
AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein.                 28   4.7  
AB209068-1|BAD92305.1|  636|Homo sapiens ash1 (absent, small, or...    28   4.7  
AB037841-1|BAA92658.1| 1349|Homo sapiens KIAA1420 protein protein.     28   4.7  
AL138762-3|CAH70950.1| 1173|Homo sapiens chromosome 10 open read...    27   8.2  
AL138762-2|CAH70949.1| 1186|Homo sapiens chromosome 10 open read...    27   8.2  
AL133215-19|CAI10933.1| 1173|Homo sapiens chromosome 10 open rea...    27   8.2  
AL133215-18|CAI10932.1| 1186|Homo sapiens chromosome 10 open rea...    27   8.2  
AK124693-1|BAC85927.1|  206|Homo sapiens protein ( Homo sapiens ...    27   8.2  
AK001374-1|BAA91657.1|  498|Homo sapiens protein ( Homo sapiens ...    27   8.2  
AF460991-1|AAN84475.1| 1173|Homo sapiens C10ORF6 protein.              27   8.2  

>BC103660-1|AAI03661.1|  544|Homo sapiens RBM15 protein protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 230 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 281


>BC103507-1|AAI03508.1|  969|Homo sapiens RBM15 protein protein.
          Length = 969

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 655 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 706


>BC103493-1|AAI03494.1|  969|Homo sapiens RBM15 protein protein.
          Length = 969

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 655 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 706


>BC098140-1|AAH98140.1|  969|Homo sapiens RBM15 protein protein.
          Length = 969

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 655 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 706


>BC062316-1|AAH62316.1|  957|Homo sapiens RBM15 protein protein.
          Length = 957

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 635 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 686


>BC047479-1|AAH47479.1|  959|Homo sapiens RBM15 protein protein.
          Length = 959

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 645 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 696


>BC006397-1|AAH06397.2|  957|Homo sapiens RBM15 protein protein.
          Length = 957

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 635 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 686


>AL355488-1|CAI19077.1|  977|Homo sapiens RNA binding motif protein
           15 protein.
          Length = 977

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 655 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 706


>AK025596-1|BAB15185.1|  532|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21943 fis, clone HEP04547. ).
          Length = 532

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 230 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 281


>AJ303090-1|CAC38829.1| 1883|Homo sapiens OTT-MAL protein.
          Length = 1883

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 655 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 706


>AJ303089-1|CAC38828.1| 1905|Homo sapiens OTT-MAL protein.
          Length = 1905

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 655 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 706


>AJ297259-2|CAC38862.1|  969|Homo sapiens one twenty two protein
           protein.
          Length = 969

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 655 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 706


>AJ297259-1|CAC38861.1|  957|Homo sapiens one twenty two protein
           protein.
          Length = 957

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 655 RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 706


>AB209680-1|BAD92917.1|  316|Homo sapiens RNA binding motif protein
           15 variant protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -3

Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLD-YNQGYDRPRALCLRQPWPIRRRR 18
           + P S   R  +C P      P      D YN   DR   L L +P PIR RR
Sbjct: 14  RSPESDRPRKRHCAPSPDR-SPELSSSRDRYNSDNDRSSRLLLERPSPIRDRR 65


>AL353807-3|CAI13211.2| 2964|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2964

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 122  VPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 244
            +PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1093 LPSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1129


>AL353807-2|CAI13212.1| 2969|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2969

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 122  VPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 244
            +PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1093 LPSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1129


>AL139410-7|CAI12716.2| 2964|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2964

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 122  VPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 244
            +PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1093 LPSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1129


>AL139410-6|CAI12722.1| 2969|Homo sapiens ash1 (absent, small, or
            homeotic)-like (Drosophila) protein.
          Length = 2969

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 122  VPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 244
            +PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1093 LPSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1129


>AF257305-1|AAF68983.1| 2969|Homo sapiens ASH1 protein.
          Length = 2969

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 122  VPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 244
            +PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1093 LPSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1129


>AB209068-1|BAD92305.1|  636|Homo sapiens ash1 (absent, small, or
           homeotic)-like variant protein.
          Length = 636

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 122 VPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 244
           +PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 384 LPSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 420


>AB037841-1|BAA92658.1| 1349|Homo sapiens KIAA1420 protein protein.
          Length = 1349

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 122  VPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVD 244
            +PS  +S  ++   P P  SQ S+G SG   P+S+   FV+
Sbjct: 1097 LPSSASSSEIL---PSPICSQ-SSGTSGGQSPVSSDAGFVE 1133


>AL138762-3|CAH70950.1| 1173|Homo sapiens chromosome 10 open reading
           frame 6 protein.
          Length = 1173

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 15  FSSSPYWPWLP 47
           FS SP WPW+P
Sbjct: 840 FSDSPVWPWIP 850


>AL138762-2|CAH70949.1| 1186|Homo sapiens chromosome 10 open reading
           frame 6 protein.
          Length = 1186

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 15  FSSSPYWPWLP 47
           FS SP WPW+P
Sbjct: 840 FSDSPVWPWIP 850


>AL133215-19|CAI10933.1| 1173|Homo sapiens chromosome 10 open
           reading frame 6 protein.
          Length = 1173

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 15  FSSSPYWPWLP 47
           FS SP WPW+P
Sbjct: 840 FSDSPVWPWIP 850


>AL133215-18|CAI10932.1| 1186|Homo sapiens chromosome 10 open
           reading frame 6 protein.
          Length = 1186

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 15  FSSSPYWPWLP 47
           FS SP WPW+P
Sbjct: 840 FSDSPVWPWIP 850


>AK124693-1|BAC85927.1|  206|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42703 fis, clone BRAMY3005932, moderately
           similar to Diacylglycerol kinase, zeta (EC 2.7.1.107).
           ).
          Length = 206

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 146 GHYCRPMEHHYCP 108
           GH C P+ H YCP
Sbjct: 90  GHICHPLGHPYCP 102


>AK001374-1|BAA91657.1|  498|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10512 fis, clone NT2RP2000658. ).
          Length = 498

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 15  FSSSPYWPWLP 47
           FS SP WPW+P
Sbjct: 165 FSDSPVWPWIP 175


>AF460991-1|AAN84475.1| 1173|Homo sapiens C10ORF6 protein.
          Length = 1173

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 15  FSSSPYWPWLP 47
           FS SP WPW+P
Sbjct: 840 FSDSPVWPWIP 850


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,868,118
Number of Sequences: 237096
Number of extensions: 942839
Number of successful extensions: 2426
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2426
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -