Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_A01
(262 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 29 0.60
Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical p... 29 0.60
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 28 1.1
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 1.1
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 27 1.8
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 27 2.4
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 2.4
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 26 3.2
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 26 3.2
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 26 3.2
AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical ... 26 3.2
AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical ... 26 4.2
Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 25 5.6
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 25 5.6
U49947-4|AAU05586.1| 192|Caenorhabditis elegans Hypothetical pr... 25 5.6
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 25 5.6
AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical ... 25 5.6
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 25 7.4
AF016417-6|AAB65283.2| 313|Caenorhabditis elegans Hypothetical ... 25 7.4
AF047657-12|AAK18941.3| 367|Caenorhabditis elegans Serpentine r... 25 9.8
AF039047-6|AAB94226.1| 186|Caenorhabditis elegans Hypothetical ... 25 9.8
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 28.7 bits (61), Expect = 0.60
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 152 VIANPDPFFSQPSNGPSGNYEPISTGPAF 238
V A P P F+ P+ P PI GPAF
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAF 138
>Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical
protein C39E9.10 protein.
Length = 488
Score = 28.7 bits (61), Expect = 0.60
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 57 CTWSIITLIIIQARFTWW-TIVVFHRTA 137
CTW L+ + +WW V+ H TA
Sbjct: 229 CTWGYTALVFVSGTLSWWEPTVIQHLTA 256
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 152 VIANPDPFFSQPSNGPSGNYEPISTGPAF 238
V A P P F+ P+ P P+ GPAF
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAF 151
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -3
Query: 122 HHYCPPREPGLDYNQGYDRPR--ALCLRQPWPIR 27
HH PR LD D P + C+++PWP +
Sbjct: 1649 HHIGIPRRASLDQFYRKDLPATCSACIKEPWPTK 1682
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +2
Query: 110 DNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPA 235
D SG P G DP +QPS GP G + P P+
Sbjct: 291 DPSGAPPSGGPPGPF----DPSGAQPSGGPPGPFNPSGAPPS 328
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 110 DNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPA 235
D SG P G DP + PS GP G ++P P+
Sbjct: 366 DPSGAPPSGGPPGPF----DPSGAPPSGGPPGPFDPSGAPPS 403
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 167 DPFFSQPSNGPSGNYEPISTGPA 235
DP + PS GP G ++P P+
Sbjct: 276 DPSGAPPSGGPPGPFDPSGAPPS 298
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 164 PDPFFSQPSNGPSGNYEPIS 223
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 26.6 bits (56), Expect = 2.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 164 PDPFFSQPSNGPSGNYEPIS 223
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +2
Query: 56 VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPF-FSQPSNGPSGN--YEPIST 226
V +D+ P VH + + GNS + +P+P +P++ P+ + P
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511
Query: 227 GPAF 238
GPAF
Sbjct: 512 GPAF 515
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +2
Query: 56 VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPF-FSQPSNGPSGN--YEPIST 226
V +D+ P VH + + GNS + +P+P +P++ P+ + P
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511
Query: 227 GPAF 238
GPAF
Sbjct: 512 GPAF 515
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +2
Query: 56 VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPF-FSQPSNGPSGN--YEPIST 226
V +D+ P VH + + GNS + +P+P +P++ P+ + P
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511
Query: 227 GPAF 238
GPAF
Sbjct: 512 GPAF 515
>AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.4a protein.
Length = 527
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 134 GNSDHVVIANPDPFFSQPSNGPSG 205
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSGG 499
>AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.5a protein.
Length = 527
Score = 25.8 bits (54), Expect = 4.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 134 GNSDHVVIANPDPFFSQPSNGPSG 205
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSRG 499
>Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical
protein M110.4b protein.
Length = 1155
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -3
Query: 140 YCRPMEHHYCPPREPGLDYNQ-GYDRP 63
Y +P +HY PP+ P GY RP
Sbjct: 63 YNQPQTNHYYPPQAPQHQQQYGGYQRP 89
>Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical
protein M110.4a protein.
Length = 1156
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -3
Query: 140 YCRPMEHHYCPPREPGLDYNQ-GYDRP 63
Y +P +HY PP+ P GY RP
Sbjct: 63 YNQPQTNHYYPPQAPQHQQQYGGYQRP 89
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLDYNQGYDRPRALC 51
+ P S QRG C P PPR P D + P C
Sbjct: 1908 RSPDSS-QRGRVCEPPPPPSPPPRHPCQDPERNDCHPAGTC 1947
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLDYNQGYDRPRALC 51
+ P S QRG C P PPR P D + P C
Sbjct: 2492 RSPDSS-QRGRVCEPPPPPSPPPRHPCQDPERNDCHPAGTC 2531
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLDYNQGYDRPRALC 51
+ P S QRG C P PPR P D + P C
Sbjct: 1908 RSPDSS-QRGRVCEPPPPPSPPPRHPCQDPERNDCHPAGTC 1947
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLDYNQGYDRPRALC 51
+ P S QRG C P PPR P D + P C
Sbjct: 2492 RSPDSS-QRGRVCEPPPPPSPPPRHPCQDPERNDCHPAGTC 2531
>U49947-4|AAU05586.1| 192|Caenorhabditis elegans Hypothetical
protein C30G4.4b protein.
Length = 192
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 68 DHNPDYNPGQVHVVDNSGVPSDGN-SDHVVIANPDPFFSQPSNGPS 202
D +P +P V SG+P + H++ NP P ++ P P+
Sbjct: 92 DIHPSSSPSVVQ--PTSGIPVQQRPASHLIAPNPKPVYTVPKVAPT 135
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/41 (34%), Positives = 16/41 (39%)
Frame = -3
Query: 173 KDPGSQ*QRGHYCRPMEHHYCPPREPGLDYNQGYDRPRALC 51
+ P S QRG C P PPR P D + P C
Sbjct: 2492 RSPDSS-QRGRVCEPPPPPSPPPRHPCQDPERNDCHPAGTC 2531
>AF002196-7|AAB53977.1| 254|Caenorhabditis elegans Hypothetical
protein C09D4.2 protein.
Length = 254
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 59 HVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPF-FSQPSNG 196
H V N YNP + + + GV S+ + + NP P FS P G
Sbjct: 158 HSVCVNATYNPVSIGLDLSIGVDGHYFSEEISLRNPPPVCFSLPIPG 204
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 140 SDHVVIANPDP 172
SDH++IA PDP
Sbjct: 519 SDHIIIATPDP 529
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 140 SDHVVIANPDP 172
SDH++IA PDP
Sbjct: 519 SDHIIIATPDP 529
>AF016417-6|AAB65283.2| 313|Caenorhabditis elegans Hypothetical
protein F17A9.6 protein.
Length = 313
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 9 SCFSSSPYWPWLPQTECTWSI 71
SCF++SPY P Q C+ S+
Sbjct: 5 SCFTNSPYTPNYTQYGCSNSV 25
>AF047657-12|AAK18941.3| 367|Caenorhabditis elegans Serpentine
receptor, class w protein4 protein.
Length = 367
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 63 WSIITLIIIQARFTWWTIVVFHRTAI 140
W++ T+I + T WT+VVF R I
Sbjct: 157 WALWTIIGVLVVNTAWTLVVFGRHKI 182
>AF039047-6|AAB94226.1| 186|Caenorhabditis elegans Hypothetical
protein K11D12.6 protein.
Length = 186
Score = 24.6 bits (51), Expect = 9.8
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -3
Query: 137 CRPMEHHYCPPREP 96
C P +HH CP P
Sbjct: 72 CIPQDHHVCPANTP 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,653,664
Number of Sequences: 27780
Number of extensions: 143343
Number of successful extensions: 425
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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