Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P23
         (531 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass...    29   2.1  
AL132895-1|CAC14399.1|  601|Caenorhabditis elegans Hypothetical ...    28   3.6  

>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 177 protein.
          Length = 1667

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +2

Query: 218 IHLNKLSLILPKSEISRNPFLVYIIF 295
           +HL+ LSL LP + ++RN +L  +IF
Sbjct: 432 LHLSDLSLTLPDAFLNRNSYLELLIF 457


>AL132895-1|CAC14399.1|  601|Caenorhabditis elegans Hypothetical
           protein Y59A8A.1 protein.
          Length = 601

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 124 WAP*AVCKNGYGKLK*KENSAYPSLR 201
           W   A+C N +GKL    N+AY SL+
Sbjct: 242 WMEVAICANDWGKLDTVTNTAYRSLK 267


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,389,512
Number of Sequences: 27780
Number of extensions: 220386
Number of successful extensions: 451
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)