Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_P22
(343 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1840.05c |||phosphomannomutase |Schizosaccharomyces pombe|ch... 27 0.60
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 26 1.8
SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharo... 26 1.8
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 25 3.2
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 25 4.3
SPBC2F12.02c |mrpl7||mitochondrial ribosomal protein subunit L7|... 25 4.3
SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces pomb... 24 7.5
SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination ... 24 7.5
SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|... 23 9.8
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 23 9.8
SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificit... 23 9.8
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||... 23 9.8
SPCC132.02 |hst2||Sir2 family histone deacetylase Hst2|Schizosac... 23 9.8
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 23 9.8
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 23 9.8
>SPCC1840.05c |||phosphomannomutase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 0.60
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 207 LSFWQ*NSHGFSYVLPYDPQTGQ*IFPQIHNGGGRAVT 94
L++ Q +++G SYVL DP + F + NG R T
Sbjct: 289 LAYEQADANGISYVLATDPDADRFAFAEKINGAWRRFT 326
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 25.8 bits (54), Expect = 1.8
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 119 CICGKIYCPVCGSY 160
C+CG +C +CG+Y
Sbjct: 386 CLCGTHFCFLCGAY 399
>SPCC13B11.01 |adh1|adh|alcohol dehydrogenase
Adh1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 350
Score = 25.8 bits (54), Expect = 1.8
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 140 CPVCGSYGKTYENPCEFYCQKDKTHSNMTIVKNTACEVGIPCYC 271
CP G T + + YC + TH+ + I ++ EV P C
Sbjct: 114 CPHIQLSGYTVDGTFQHYCIANATHATI-IPESVPLEVAAPIMC 156
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 25.0 bits (52), Expect = 3.2
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 7/29 (24%)
Frame = +1
Query: 223 DNREKHRMRGGHPLLLY-------LGICP 288
DNR+ +R G P++LY +G+CP
Sbjct: 697 DNRQVFMVRNGEPMILYPEESAYEMGLCP 725
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 24.6 bits (51), Expect = 4.3
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -3
Query: 227 LSYCCVSCLFGSKIHTGSRTSYHMTRRRD 141
L C V+ L+G +HT + +H R+++
Sbjct: 357 LKECDVTWLYGPLLHTSMPSRHHSHRKKE 385
>SPBC2F12.02c |mrpl7||mitochondrial ribosomal protein subunit
L7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 287
Score = 24.6 bits (51), Expect = 4.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 208 DTQQYDNREKHRMRGGHPLL 267
D Y NR +MRG PLL
Sbjct: 94 DNPYYKNRPPQKMRGNKPLL 113
>SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1095
Score = 23.8 bits (49), Expect = 7.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 131 FRKYITAVAELLPSILAQRRSEEYR 57
F KY A+ LL ++L Q +E+R
Sbjct: 531 FEKYFDAIMPLLFNVLQQADGKEFR 555
>SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination
repair protein Sfr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 23.8 bits (49), Expect = 7.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 234 KTPHARWASPATVPWNMPPSVALTD 308
K+P + ASP N+ PS+A+T+
Sbjct: 108 KSPLRQTASPQVADTNLKPSLAVTN 132
>SPBC8D2.06 |||isoleucine-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1064
Score = 23.4 bits (48), Expect = 9.8
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 225 QS*KTPHARWASPATVPWNMPPSVAL 302
QS P + + T PW +P ++AL
Sbjct: 205 QSISDPEVSFLAWTTTPWTLPSNLAL 230
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 23.4 bits (48), Expect = 9.8
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 152 GSYGKTYENPCEFYCQKDKTHSNMTIVKNTACEVGIPCYCTLEY 283
G+Y ENP KD SN+ V T+ G P C L +
Sbjct: 2853 GNYSNNIENPYT----KDFEDSNLAYVLYTSGSTGKPKGCCLTH 2892
>SPAC6F12.17 |rna14||mRNA cleavage and polyadenylation specificity
factor complex subunit Rna14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 733
Score = 23.4 bits (48), Expect = 9.8
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = +1
Query: 265 LLYLGICPRLWL 300
+LY+ +CP++WL
Sbjct: 325 MLYVPLCPQIWL 336
>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 23.4 bits (48), Expect = 9.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 98 TALPPPLCICGKIYCPVCG 154
+ +P C CGK +C CG
Sbjct: 237 SVVPTVTCNCGKQFCFGCG 255
>SPCC132.02 |hst2||Sir2 family histone deacetylase
Hst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 332
Score = 23.4 bits (48), Expect = 9.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 297 PQTGAYSKVQ*QGMPTSHAVF 235
P+TG Y+ +Q +P + AVF
Sbjct: 50 PETGIYNNLQRFNLPYAEAVF 70
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 23.4 bits (48), Expect = 9.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 252 TSHAVFFTIVILLCVLSFWQ*NSHGFSYV 166
T+H V+F + + V+ + N H FS+V
Sbjct: 1439 TTHYVYFWVTMFALVICPFIYNPHQFSFV 1467
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 23.4 bits (48), Expect = 9.8
Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 7/69 (10%)
Frame = +2
Query: 128 GKIYCPVCGSYGKTYENPCEFYCQKDKT-------HSNMTIVKNTACEVGIPCYCTLEYA 286
G+I C + Y +P DKT T +K E + C C E
Sbjct: 52 GRINCVCELATNSEYRSPFILSGASDKTLRLWQLEEEYFTCIKTIELEATVNCLCVNENL 111
Query: 287 PVCGSNGQT 313
VCG + +
Sbjct: 112 VVCGCSNSS 120
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,569,384
Number of Sequences: 5004
Number of extensions: 32832
Number of successful extensions: 93
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 93
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 100068878
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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