Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_P22
(343 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0862 + 20389903-20390247,20392408-20392483,20392924-20392979 28 1.7
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 28 2.2
12_01_0415 + 3292576-3293727 27 2.9
02_01_0317 - 2128660-2128776,2129281-2129364,2129463-2129543,213... 27 2.9
05_05_0005 + 21442819-21442916,21443053-21443119,21443226-214432... 27 3.9
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 27 5.1
02_02_0447 + 10363077-10363245,10363419-10363519,10363947-103641... 27 5.1
01_06_1691 - 39215192-39215283,39215341-39215413,39215874-392166... 27 5.1
10_08_0324 + 16747117-16747330,16747432-16747559,16747675-167477... 26 6.7
09_02_0625 + 11334418-11334499,11335067-11335164,11335758-113358... 26 6.7
08_01_0705 + 6231220-6231390,6231900-6231954,6232043-6232194,623... 26 6.7
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 26 6.7
01_05_0809 - 25422832-25422919,25423887-25424443 26 6.7
09_01_0053 + 873918-874411,875255-875492,875682-875702 26 8.9
03_06_0596 + 34964109-34964189,34964286-34964481,34964567-349647... 26 8.9
02_01_0194 + 1314181-1314661,1315656-1315723,1315834-1315965,131... 26 8.9
>04_03_0862 + 20389903-20390247,20392408-20392483,20392924-20392979
Length = 158
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -3
Query: 305 R*SHRRGHIPRYSSRGCPPRMRCFSRLSYCCVSCLFGSKIHTGSRTSYHMTRRRD 141
R S RR + S+ P + + RL CC++ S + G H +RRD
Sbjct: 43 RESRRRCALGGASAASESPPLHLYQRLPKCCITSHRCSTLRAGYPADLHGQKRRD 97
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = +2
Query: 125 CGKIYCPVCGSYGKTYENPCEFYCQKDKTHSNMTIVKNTACEVGIP 262
CG ++C C + P Y +KD T + ++ A +P
Sbjct: 1449 CGHVFCKKCSDKFLVTDKPKSMYKKKDVTRRRLALLGAGALATEVP 1494
>12_01_0415 + 3292576-3293727
Length = 383
Score = 27.5 bits (58), Expect = 2.9
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 114 GGGRAVTEYISAAAIRRIPSLFILC 40
GGG E +S A IRR+ FILC
Sbjct: 38 GGGGGGEEILSVAWIRRLLEAFILC 62
>02_01_0317 -
2128660-2128776,2129281-2129364,2129463-2129543,
2130230-2130407,2130530-2130673,2130780-2130826,
2131149-2131205,2131989-2132087,2132301-2132423,
2132514-2132636,2132859-2132972,2133612-2133800,
2134408-2134574,2134707-2134791,2134891-2135085,
2135162-2135251,2135418-2135603,2135885-2135959,
2136757-2136957
Length = 784
Score = 27.5 bits (58), Expect = 2.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 119 CICGKIYCPVCGSYGKTYENP 181
C C +Y P+C YGK + P
Sbjct: 282 CHCRMVYLPMCYIYGKRFVGP 302
>05_05_0005 +
21442819-21442916,21443053-21443119,21443226-21443291,
21443368-21443414,21443480-21443543,21443627-21443707,
21443781-21443823,21443912-21443961,21444262-21444343,
21445045-21445120,21445451-21445558,21445782-21445833,
21445911-21446570,21446652-21448067
Length = 969
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 183 VNFTAKKTRHTAI*QS*KTPHARWASPATVPWNMPPSVALTDKLTPTNV 329
V FT K H +S KTP SP N+PP + ++ L+ N+
Sbjct: 558 VPFTVSKRAHIKA-ESEKTPPRPAHSPNNSLHNLPPLIPISTNLSEENI 605
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 26.6 bits (56), Expect = 5.1
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 240 PHARWASPATVPWNMPPSVALTDKLTPT 323
P AR +PA P + PP+ K+ PT
Sbjct: 199 PTARPPTPAVTPPDKPPTAVYVGKIAPT 226
>02_02_0447 +
10363077-10363245,10363419-10363519,10363947-10364140,
10364223-10364634
Length = 291
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%)
Frame = -3
Query: 116 TAVAELLPSILAQRRS--EEYRVYSFCV 39
++V +L S LA+ R +EYR+Y++CV
Sbjct: 247 SSVCQLSDSELARMRKVQDEYRIYNYCV 274
>01_06_1691 -
39215192-39215283,39215341-39215413,39215874-39216615,
39216730-39217985,39218080-39218187,39218289-39218474,
39218625-39218675
Length = 835
Score = 26.6 bits (56), Expect = 5.1
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 188 FYCQKDKTHS-NMTIVKNTACEVGIPCYCTLEYAPVCGSNGQTYANKC 328
F C++ S NM+I E+ P L Y PV S+GQTY C
Sbjct: 294 FNCRRSGPRSENMSIPPE---ELRCPISLQLMYDPVIISSGQTYERVC 338
>10_08_0324 +
16747117-16747330,16747432-16747559,16747675-16747744,
16747832-16747988,16748089-16748701,16749132-16749653,
16749686-16750279,16750359-16750709,16750808-16751395
Length = 1078
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 251 PRMRCFSRLSYCCVSCLFGSKIHTGSRTSYHMTRR 147
P+M C S+CC C FG G R H ++
Sbjct: 606 PKMTCDCWPSWCCCCCCFGG----GKRGKSHKNKK 636
>09_02_0625 +
11334418-11334499,11335067-11335164,11335758-11335831,
11335996-11336598,11336692-11337185,11338035-11338170,
11338417-11338488,11338581-11338652,11339078-11339226,
11340129-11340364,11340567-11340693,11341011-11341079,
11341172-11341361,11341465-11341857,11342084-11342195
Length = 968
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 120 VFAEKSIVPSAGHMVRRTRTRVN 188
V E I+P+ GH+V+R + +VN
Sbjct: 825 VTGEPPIIPTNGHIVQRIKEKVN 847
>08_01_0705 +
6231220-6231390,6231900-6231954,6232043-6232194,
6232252-6232335,6232614-6232797,6232885-6232988,
6233109-6233183,6233366-6233405,6233495-6233577,
6233687-6233764,6233868-6234011,6234093-6234160,
6234831-6234945,6235045-6235201,6235311-6235408
Length = 535
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/65 (23%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +2
Query: 137 YCPVCGSYGKTYENPCEFYCQKDKTHSNMTIVKNTACEVGIPCYCT-LEYAPVCGSNGQT 313
+ PV + G TY+ P + HS + +P Y T +E +P+ G+
Sbjct: 458 FAPVKNANGATYDTPDSARLMLLRLHSRWVVAAGGFLTHSVPLYMTGVEVSPLSSYAGEN 517
Query: 314 YANKC 328
C
Sbjct: 518 LEAIC 522
>07_03_1575 -
27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = -3
Query: 341 CIPVN--ICWRKFVR*SHRRGHIPRYSSRGCPPRMRCFSRLSY 219
CI VN I W F + H+ ++ G PP M C L++
Sbjct: 284 CIYVNPLIDWVHFSLLRAMKSHLEDLANEGDPPAMHCIRNLNW 326
>01_05_0809 - 25422832-25422919,25423887-25424443
Length = 214
Score = 26.2 bits (55), Expect = 6.7
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 196 PKRQDTQQYDNREKHRMRGGHPLLLYLGICP--RLWL*RTNL 315
P R +QQ D R HR GG +G P RLWL R+ L
Sbjct: 74 PWRPSSQQRDGRRHHRHHGG------VGGSPRYRLWLHRSRL 109
>09_01_0053 + 873918-874411,875255-875492,875682-875702
Length = 250
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 243 HARWASPATVPWNMPPSVALTDKLTPT 323
HA+W+ ATV + P + + ++L T
Sbjct: 192 HAKWSPAATVTFMYEPEIRINEELMET 218
>03_06_0596 +
34964109-34964189,34964286-34964481,34964567-34964775,
34964868-34964970,34965053-34965227,34965617-34965883,
34965966-34966311,34966396-34966533,34966645-34966770,
34966866-34967078,34967171-34967462,34967559-34967755,
34967844-34968194,34968290-34968874
Length = 1092
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -3
Query: 254 PPRMRCFSRLSYCCVSCLFGSKIHTGSRTSYHMTRRRDNRFFRK 123
PP C +C C FG++ + +T+ T ++ FF++
Sbjct: 655 PPSRTCNCWPKWCICCCCFGNRTNK-KKTAKPKTEKKKRLFFKR 697
>02_01_0194 +
1314181-1314661,1315656-1315723,1315834-1315965,
1317581-1317742,1318288-1318611
Length = 388
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 319 GVSLSVRATDGGIFQGTVAG 260
G+S+S+ ATDG + G VAG
Sbjct: 253 GMSVSLAATDGRVIGGGVAG 272
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,677,161
Number of Sequences: 37544
Number of extensions: 230969
Number of successful extensions: 689
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 689
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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