Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P22
         (343 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              33   0.001
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          23   1.3  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   1.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   2.4  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   4.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   4.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   5.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   5.4  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   5.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   5.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   7.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   7.2  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              20   9.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   9.5  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    20   9.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 33.1 bits (72), Expect = 0.001
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 269 CTLEYAPVCGSNGQTYANKCSL 334
           C   + PVC SNG+ YAN C L
Sbjct: 110 CPRRHRPVCASNGKIYANHCEL 131



 Score = 31.5 bits (68), Expect = 0.003
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 125 CGKIYCPVCGSYGKTYENPCEFYCQKDKTHSNMTIVKN 238
           C + + PVC S GK Y N CE +  +   HS  ++ K+
Sbjct: 110 CPRRHRPVCASNGKIYANHCELH--RAACHSGSSLTKS 145


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +2

Query: 260 PCYCTLEYAPVCGSNGQTYANKCSLE 337
           PCYCT E   +  +  Q       L+
Sbjct: 1   PCYCTCEKCKITANRQQVMRQNMKLK 26


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 341 CIPVNICWRKFVR*SHRRGHIPRYSSRGCPP 249
           C+  +I W KF +    R   P Y   G  P
Sbjct: 41  CVGDDIAWMKFDKEGRLRAINPEYGFFGVAP 71


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 128 RKYITAVAELLPSILAQRRSEEYRVYSFCV 39
           RK  T    ++ S   Q++SEE  +   CV
Sbjct: 795 RKTATTTQPVISSRKEQKKSEEKNINDHCV 824


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -2

Query: 114 GGGRAVTEYISAAAIRRIPSLFILCLNINGTNLEF 10
           G G  V  ++S  ++R   +LF++ L I+   + F
Sbjct: 69  GNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMF 103


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 128 GKIYCPVCGSYGKTY 172
           G  YC  CG +  TY
Sbjct: 539 GDAYCVACGLHRDTY 553


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 284 APVCGSNGQTYANK 325
           A +CG+ G +YA +
Sbjct: 12  AAICGAQGASYAGR 25


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 284 APVCGSNGQTYANK 325
           A +CG+ G +YA +
Sbjct: 12  AAICGAQGASYAGR 25


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 114 GGGRAVTEYISAAAIRRIPSLFILCLNIN 28
           G G  V  ++S  ++R   +LF++ L I+
Sbjct: 35  GNGMVVYIFLSTKSLRTPSNLFVINLAIS 63


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 111 RRYVFAEKSIVPSAG 155
           RR +FA + ++ SAG
Sbjct: 308 RRIIFARREVILSAG 322


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 206 CLFGSKIHTGSRT 168
           CLFG+ ++  SRT
Sbjct: 532 CLFGNTVNLTSRT 544


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 206 CLFGSKIHTGSRT 168
           CLFG+ ++  SRT
Sbjct: 532 CLFGNTVNLTSRT 544


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +2

Query: 140 CPVCGSYG 163
           CP+CG+ G
Sbjct: 75  CPICGACG 82


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -2

Query: 168  VLPYDPQTGQ*IFPQIHNGGGRAVTEY 88
            VL   P T   +    HN  G AV EY
Sbjct: 1521 VLDLVPATWYHLRVTAHNNAGFAVAEY 1547


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 43  QNE*TRYSSDRRCA 84
           Q+  +RYS +RRC+
Sbjct: 225 QHTSSRYSRERRCS 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,832
Number of Sequences: 438
Number of extensions: 2324
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)