Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P20
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   7.7  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.7  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/28 (25%), Positives = 10/28 (35%)
 Frame = -3

Query: 252 HHKSQIYFLHPRNFWNIGNLLFLXYSSG 169
           HH   +Y  HP   W    +    +  G
Sbjct: 151 HHLGSVYSRHPYESWPFNTMSGATHHGG 178


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 236 IWLLWCSE 259
           IW LWCS+
Sbjct: 570 IWPLWCSQ 577


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 99  YLNKLKKQHNAIVNTTH*ASCR 34
           Y+ K K + + I++ TH   CR
Sbjct: 72  YVCKAKDEGSCIIDKTHRNQCR 93


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 99  YLNKLKKQHNAIVNTTH*ASCR 34
           Y+ K K + + I++ TH   CR
Sbjct: 72  YVCKAKDEGSCIIDKTHRNQCR 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,787
Number of Sequences: 336
Number of extensions: 2376
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)