Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P20
         (584 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF255671-1|AAG01798.1|  732|Drosophila melanogaster Stretchin-ML...    29   6.1  
AF255669-1|AAG01796.1|  623|Drosophila melanogaster Stretchin-ML...    29   6.1  
AE013599-2145|AAM70938.1|  785|Drosophila melanogaster CG18255-P...    29   6.1  
AE013599-2144|AAF58089.2|  929|Drosophila melanogaster CG18255-P...    29   6.1  
AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-P...    29   6.1  
AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-P...    29   6.1  
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    29   6.1  

>AF255671-1|AAG01798.1|  732|Drosophila melanogaster Stretchin-MLCK
           protein.
          Length = 732

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 333 VKQVQGELGEGRKTRTGSVFTAANSKGVYGSGNYDLSNLEGR 458
           V   Q  LG GR T TG+    +NS G  G+GN   +N E R
Sbjct: 675 VASAQRHLGNGRGTGTGNGNGNSNSNG-NGNGNTAETNRESR 715


>AF255669-1|AAG01796.1|  623|Drosophila melanogaster Stretchin-MLCK
           protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 333 VKQVQGELGEGRKTRTGSVFTAANSKGVYGSGNYDLSNLEGR 458
           V   Q  LG GR T TG+    +NS G  G+GN   +N E R
Sbjct: 566 VASAQRHLGNGRGTGTGNGNGNSNSNG-NGNGNTAETNRESR 606


>AE013599-2145|AAM70938.1|  785|Drosophila melanogaster CG18255-PG,
           isoform G protein.
          Length = 785

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 333 VKQVQGELGEGRKTRTGSVFTAANSKGVYGSGNYDLSNLEGR 458
           V   Q  LG GR T TG+    +NS G  G+GN   +N E R
Sbjct: 728 VASAQRHLGNGRGTGTGNGNGNSNSNG-NGNGNTAETNRESR 768


>AE013599-2144|AAF58089.2|  929|Drosophila melanogaster CG18255-PB,
           isoform B protein.
          Length = 929

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 333 VKQVQGELGEGRKTRTGSVFTAANSKGVYGSGNYDLSNLEGR 458
           V   Q  LG GR T TG+    +NS G  G+GN   +N E R
Sbjct: 872 VASAQRHLGNGRGTGTGNGNGNSNSNG-NGNGNTAETNRESR 912


>AE013599-2143|AAF58090.2| 1506|Drosophila melanogaster CG18255-PF,
            isoform F protein.
          Length = 1506

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 333  VKQVQGELGEGRKTRTGSVFTAANSKGVYGSGNYDLSNLEGR 458
            V   Q  LG GR T TG+    +NS G  G+GN   +N E R
Sbjct: 1449 VASAQRHLGNGRGTGTGNGNGNSNSNG-NGNGNTAETNRESR 1489


>AE013599-2142|AAM70937.1| 4463|Drosophila melanogaster CG18255-PC,
            isoform C protein.
          Length = 4463

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 333  VKQVQGELGEGRKTRTGSVFTAANSKGVYGSGNYDLSNLEGR 458
            V   Q  LG GR T TG+    +NS G  G+GN   +N E R
Sbjct: 4406 VASAQRHLGNGRGTGTGNGNGNSNSNG-NGNGNTAETNRESR 4446


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 333  VKQVQGELGEGRKTRTGSVFTAANSKGVYGSGNYDLSNLEGR 458
            V   Q  LG GR T TG+    +NS G  G+GN   +N E R
Sbjct: 9213 VASAQRHLGNGRGTGTGNGNGNSNSNG-NGNGNTAETNRESR 9253


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,460,822
Number of Sequences: 53049
Number of extensions: 384881
Number of successful extensions: 966
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 966
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)