Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P17
         (519 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5DUR4 Cluster: Predicted protein; n=1; Lodderomyces el...    38   0.18 
UniRef50_P25723 Cluster: Dorsal-ventral patterning protein tollo...    34   1.7  
UniRef50_Q54U60 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q54IV2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_UPI0001509FE2 Cluster: TPR Domain containing protein; n...    32   9.0  
UniRef50_A6Q7B7 Cluster: DNA mismatch repair protein; n=1; Sulfu...    32   9.0  
UniRef50_Q8I3P9 Cluster: Putative uncharacterized protein PFE107...    32   9.0  

>UniRef50_A5DUR4 Cluster: Predicted protein; n=1; Lodderomyces
           elongisporus NRRL YB-4239|Rep: Predicted protein -
           Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 157

 Score = 37.5 bits (83), Expect = 0.18
 Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = +2

Query: 5   NPSPLPLLQLISFHNRVHVFYVIFIYPQVILFFFLLVNGNLC---VHTICANVM*VRFSI 175
           +PSP P +    F  +  +F +IF+   + L ++  +  +L      ++C NVM ++ S+
Sbjct: 28  SPSPTPSVFHPLFRGKTSLFILIFVSVSISLTYYSRLEHSLFQKHYSSVCLNVMYIKSSV 87

Query: 176 LYQRYQAPTERW 211
             + +  PT +W
Sbjct: 88  YIRTHTTPTHKW 99


>UniRef50_P25723 Cluster: Dorsal-ventral patterning protein tolloid
           precursor; n=10; Drosophila|Rep: Dorsal-ventral
           patterning protein tolloid precursor - Drosophila
           melanogaster (Fruit fly)
          Length = 1067

 Score = 34.3 bits (75), Expect = 1.7
 Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
 Frame = +3

Query: 186 VTKLQQNGGLSCSNFPWSFVGTSECMLRVV-------FYNKLNLNTITKLFH-TKRHQDY 341
           V   + NG L   ++P  +  + +C+  VV       F N  + +     FH TK + DY
Sbjct: 638 VDATKSNGSLYSPSYPDVYPNSKQCVWEVVAPPNHAVFLNFSHFDLEGTRFHYTKCNYDY 697

Query: 342 MI*SQVHKFNELKKTIATCQTEIPP-KNSQVILIQL 446
           +I     + N LKK    C  E+PP  NS+  +++L
Sbjct: 698 LIIYSKMRDNRLKKIGIYCGHELPPVVNSEQSILRL 733


>UniRef50_Q54U60 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1129

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 44  HNRVHVFYVIFI-YPQVILFFFLLVN 118
           HN  HVFY + I YP +I +FFL+ +
Sbjct: 877 HNSYHVFYYLLIKYPSIIKYFFLVAD 902


>UniRef50_Q54IV2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1246

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = +2

Query: 44  HNRVHVFYVIFI-YPQVILFFFLL 112
           HN  HVFY I + YP +I +FFL+
Sbjct: 922 HNSYHVFYYILLKYPSIIKYFFLI 945


>UniRef50_UPI0001509FE2 Cluster: TPR Domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: TPR Domain containing
           protein - Tetrahymena thermophila SB210
          Length = 986

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = +3

Query: 291 NLNTITKLFHTKRHQDYMI*SQVHKFNELKKTIATCQTEIP--PKNSQVILIQLPDNIST 464
           N+ + TK+F+ K H +Y    + + +N LKK I T    +    K SQ+ + Q   ++  
Sbjct: 401 NILSSTKIFNQKTHMNYGN-QETYVYNNLKKNIQTEVNSVSNLKKESQIQITQEQQHVKQ 459

Query: 465 ISSAYVVHIFPLY 503
             S  +  + PL+
Sbjct: 460 QKSKILDELEPLF 472


>UniRef50_A6Q7B7 Cluster: DNA mismatch repair protein; n=1;
           Sulfurovum sp. NBC37-1|Rep: DNA mismatch repair protein
           - Sulfurovum sp. (strain NBC37-1)
          Length = 738

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 16/42 (38%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = +3

Query: 267 RVVFYNKLNLN-TITKLFHTKRHQDYMI*SQVHKFNELKKTI 389
           R +  NK+++  T+ KL H+ R +DY++ +QVH FN  ++T+
Sbjct: 141 RAIKQNKIDIKETLYKLAHSSRLRDYLVDTQVH-FNGGEETL 181


>UniRef50_Q8I3P9 Cluster: Putative uncharacterized protein PFE1070c;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PFE1070c - Plasmodium falciparum (isolate 3D7)
          Length = 1345

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3

Query: 166  SYLHDIGTNCVYTQIAINXXXXXENYLRIDKDNVEDMHSIMEGNKLKEGE 17
            +Y +DI  N VY   +        N+ + DK+N+ DM+S+   N   E E
Sbjct: 1119 NYFYDISKNSVYDYSSQLYTKTIINFKKEDKENLNDMYSVNVTNHNDEKE 1168


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,353,864
Number of Sequences: 1657284
Number of extensions: 9277714
Number of successful extensions: 20358
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20344
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)