SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P17
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   1.6  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   2.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   6.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   6.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.7  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 172 NLVSALPSSNRTVAYPAQTFHGALS 246
           +LV  + +S+  +AYP  +FH   S
Sbjct: 10  DLVLTIEASDAVLAYPQPSFHQTFS 34


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 265 SIHSEVPTKLHGKFEQDRPP 206
           SI  E  TK+HG   + RPP
Sbjct: 67  SIIDEAATKVHGTTVRVRPP 86


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 265 SIHSEVPTKLHGKFEQDRPP 206
           SI  E  TK+HG   + RPP
Sbjct: 381 SIIDEAATKVHGTTVRVRPP 400


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 265 SIHSEVPTKLHGKFEQDRPP 206
           SI  E  TK+HG   + RPP
Sbjct: 614 SIIDEAATKVHGTTVRVRPP 633


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 265 SIHSEVPTKLHGKFEQDRPP 206
           SI  E  TK+HG   + RPP
Sbjct: 614 SIIDEAATKVHGTTVRVRPP 633


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 53  VHVFYVIFIYPQVILFFFLL 112
           VH+ +++ IY  V+  FFLL
Sbjct: 125 VHLLFLLCIYYFVVPLFFLL 144


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 360 HKFNELKKTIATCQTEIPPKNSQVI---LIQLPDN 455
           H F +      TCQ  I P+N  +I    +QL +N
Sbjct: 80  HDFTQHLSQYDTCQQGIYPENKTLINETSLQLDEN 114


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 360 HKFNELKKTIATCQTEIPPKNSQVI---LIQLPDN 455
           H F +      TCQ  I P+N  +I    +QL +N
Sbjct: 80  HDFTQHLSQYDTCQQGIYPENKTLINETSLQLDEN 114


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 41  FHNRVHVFYVIFIY 82
           F N +H FY + +Y
Sbjct: 155 FQNYIHFFYQLLLY 168


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 467 IFSICGSYISIVFI 508
           +FSICG+  S +FI
Sbjct: 270 LFSICGAASSYLFI 283


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 360 HKFNELKKTIATCQTEIPPKNSQVI---LIQLPDN 455
           H F +      TCQ  I P+N  +I    +QL +N
Sbjct: 80  HDFTQHLSQYDTCQQGIYPENKTLINETSLQLDEN 114


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = +2

Query: 59  VFYVIFIYPQVILFFFLLVNGNLCVHTICANV 154
           + Y+IF Y  ++    + +    C H I   V
Sbjct: 154 ILYLIFSYCPIVTTGIIKIQFATCAHLILQRV 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,316
Number of Sequences: 336
Number of extensions: 2765
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -