Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P17
         (519 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0042 + 20180151-20180468,20181595-20181665,20182929-201830...    27   6.8  

>03_05_0042 +
           20180151-20180468,20181595-20181665,20182929-20183087,
           20183598-20183664,20183913-20184008,20184687-20184733,
           20185113-20185193,20185704-20185806,20185967-20186028,
           20187188-20187302,20193191-20195087,20195206-20195492
          Length = 1100

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -1

Query: 321 CEIV*LLCSS*VYYRRQRVAYILRCRQSSMESLSRIGHRSVGAW*R*YKIE 169
           CE+V + C    +YR  RVA  L   Q    +L R+    V AW   YK+E
Sbjct: 469 CELVGMRCIE--HYRPHRVARQLSFDQDIPGTLPRVNSNWVAAW-ETYKME 516


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,676,132
Number of Sequences: 37544
Number of extensions: 253203
Number of successful extensions: 501
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)