Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P15
         (416 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical ...    27   5.5  
AL132952-2|CAB63380.1|  190|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z99281-51|CAE18031.2|  281|Caenorhabditis elegans Hypothetical p...    26   9.5  
Z54342-6|CAA91148.1|  459|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>AF016661-1|AAB66049.2|  514|Caenorhabditis elegans Hypothetical
           protein F02E11.2 protein.
          Length = 514

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 66  INFNSFISNLCMFYSD*RFYSRYKNE 143
           ++ N+F+  LC F+    F+S +KNE
Sbjct: 84  VSTNTFLLFLCFFFGFFGFFSNFKNE 109


>AL132952-2|CAB63380.1|  190|Caenorhabditis elegans Hypothetical
           protein Y51H4A.2 protein.
          Length = 190

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 353 FPLSLCKCNVTFEAPTPPSLRVTSASVRDRSRAIIPLII 237
           FP  +    +  + P P  L V +A+ R+R RA I  I+
Sbjct: 152 FPKKITPFRLLGDIPAPLKLSVRAAAERERERAAITRIV 190


>Z99281-51|CAE18031.2|  281|Caenorhabditis elegans Hypothetical
           protein Y57G11C.48 protein.
          Length = 281

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 274 TDAEVTLKDGGVGASNVTLHLQSER 348
           TDA+ T+K+ G G + VTL +  +R
Sbjct: 251 TDAKSTIKEAGWGDNKVTLVIDEDR 275


>Z54342-6|CAA91148.1|  459|Caenorhabditis elegans Hypothetical
           protein C08H9.11 protein.
          Length = 459

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 393 IIWTKYKYEIVQSISSFALQM 331
           I WT+ KYE ++S SSF  ++
Sbjct: 219 IFWTRPKYEDIKSYSSFIQEL 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,721,233
Number of Sequences: 27780
Number of extensions: 158339
Number of successful extensions: 362
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)