Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P14
         (500 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    24   0.88 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    23   1.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   2.7  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   2.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.2  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 415 THWHSPRW 392
           THWHSPR+
Sbjct: 69  THWHSPRF 76


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 200 RNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWP 301
           R + S+P   S  V++ CS + T+A     + +P
Sbjct: 88  RTSTSNPTYSSRSVMTSCSSVPTTASYGSDLYFP 121


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 289 DDLAQRCAQYKKDGCH 336
           D++A RCA  +++ CH
Sbjct: 161 DEIAIRCAFLERENCH 176


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 466 QLWPRYADSGRWRRSEPTH 410
           +LWPR A  G    SEPT+
Sbjct: 534 RLWPRAAALGEVLWSEPTN 552


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 61  QCFRLQCPGDACP 23
           +CF ++CP   CP
Sbjct: 704 KCFTMECPQVTCP 716


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
 Frame = +3

Query: 336 LCQVALRIEDRPQ---HSIVPSHLGECQCVGSLRLHLP 440
           L  +A RI    Q   H   P H  E  C+  L  H+P
Sbjct: 330 LASLAFRIFQSTQYVRHKNTPYHTPEPDCIHELLGHMP 367


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 78  IPSTPVQF*PGTL*EHFGSDSLPRNPVPED 167
           +P+ P  F PG L   + ++S P  P P +
Sbjct: 50  LPTNPAFFHPGLLPLAWQANSPPSPPAPSE 79


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/38 (18%), Positives = 20/38 (52%)
 Frame = -3

Query: 189 YKGSSIICLLVQGFVEENHSRNVLRECRVRTEQELTVF 76
           Y  +++ C   +GF   + ++N + +C+     E+ ++
Sbjct: 198 YHYNALTCEGCKGFFRRSITKNAVYQCKYGNNCEIDMY 235


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.136    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,655
Number of Sequences: 336
Number of extensions: 3207
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)