Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_P14
(500 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 30 0.17
SPBC16A3.08c |||nuclear telomere cap complex subunit |Schizosacc... 28 0.91
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 1.6
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 27 1.6
SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces... 27 2.1
SPBC1347.10 |cdc23|mcm10|MCM-associated protein Mcm10|Schizosacc... 27 2.1
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 26 2.8
SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr... 25 4.8
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 25 4.8
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 25 6.4
SPAC1687.13c |csn5||COP9/signalosome complex subunit Csn5|Schizo... 25 6.4
SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyc... 25 6.4
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 25 8.4
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 25 8.4
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 25 8.4
SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr 2... 25 8.4
SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|ch... 25 8.4
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 30.3 bits (65), Expect = 0.17
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +1
Query: 40 DIGVENTEENRRKYRQLLFSSDPALSENISGVILFHETLYQKTDDGTPLVSLLEKRGIIP 219
D G+E +E NRRK +FS S ++S H TL D + V++ + G +P
Sbjct: 494 DSGIEASESNRRK--SDIFSFSGRNSFSVSRPSSSHSTLSYANDSASSAVNVAGETGSLP 551
Query: 220 GIK 228
++
Sbjct: 552 PLR 554
>SPBC16A3.08c |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 27.9 bits (59), Expect = 0.91
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +2
Query: 140 SSTKPCTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVALST 319
+ T + L YLS R +A+ PV R+ L + ++ SAP ++ + A S
Sbjct: 164 AQTPAAEEENVKTLDEYLSERKSAAKPVGRTVEKLENATKVEKSAPEELFASLKKSA-SQ 222
Query: 320 RRTAA 334
+++AA
Sbjct: 223 KKSAA 227
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 27.1 bits (57), Expect = 1.6
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +1
Query: 121 NISGVILFHETLYQKTDDGTPLVSLLEKRGIIPGIKVDKGVVPLFGSEDECT-TQGLDDL 297
NI GV+ + ++ + + L +L EK G I GSE + T+ D+
Sbjct: 357 NIVGVVATLSSSSEENSEASNLSTLFEKSGNFEEI---------LGSESHSSITEKTRDI 407
Query: 298 AQRCAQYKKDGCHFAKW 348
A+ A + K+G +F+ W
Sbjct: 408 AKNVATWLKNGENFSSW 424
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 276 GALVFRSEQGDNTLVDLDTGDDAAFLQ 196
G + SE NTLV D DD+ FL+
Sbjct: 238 GETIDESEDSKNTLVTEDENDDSVFLE 264
>SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 578
Score = 26.6 bits (56), Expect = 2.1
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +2
Query: 164 RQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVALSTRRTAAT-- 337
RQ+ +LP A++PV +S + + + +T VS T SVA ST AA+
Sbjct: 185 RQLKQLP---DAEQPAAAPVKKSKQKSASTAPPRTRRNSSVSSTSASVAASTAPKAASPA 241
Query: 338 -LPSG 349
LP G
Sbjct: 242 VLPEG 246
>SPBC1347.10 |cdc23|mcm10|MCM-associated protein
Mcm10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 2.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 5 MSPLVQWASVSRTLESKTLRRIAVNTVNSCSVLTRHSLRT 124
+SP V + S R ++LR+I + +S T HS T
Sbjct: 524 VSPAVVFTSSPRIFSPQSLRKIGFDPTHSADASTTHSTAT 563
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 26.2 bits (55), Expect = 2.8
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 182 PLYLS-WRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVALSTRRTAATLPSGVAY 358
P ++S W + A+ + S +VL+P ++ LKV T P A T + PS A
Sbjct: 355 PQFVSNWNHCATPTIPVSLQVLTP------NSSLKVDPTTPLTA-PIHATESFWPSAAA- 406
Query: 359 *RSAATLHRTKPSWRMPMCWLATPPSARV 445
+AA +H S+ MP+ P +A++
Sbjct: 407 --AAAAVHNNANSY-MPITPTPYPNNAKI 432
>SPBP4H10.15 |||aconitate hydratase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 905
Score = 25.4 bits (53), Expect = 4.8
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +1
Query: 196 LEKRGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 303
L+K+G++P V++ +ED+ +T+G++ L +
Sbjct: 703 LKKQGVLPLTFVNEADYEKIDAEDKVSTRGIEQLLE 738
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.4 bits (53), Expect = 4.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -1
Query: 410 LAFSKMAWYDGVLRPIFNTQ 351
+ F+K+ WY L +FNT+
Sbjct: 33 ITFAKLRWYGKTLLEVFNTE 52
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 25.0 bits (52), Expect = 6.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 1 ADESTGTMGKRLQDIGVENTEENRRKYRQLLFSSDPALSENISGVIL 141
AD+ T G + + + N EN+ R SSDPA +N +L
Sbjct: 529 ADKMTDMRGLCVNPLLLGNFVENKDLPRMASISSDPATLKNAIAFVL 575
>SPAC1687.13c |csn5||COP9/signalosome complex subunit
Csn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 299
Score = 25.0 bits (52), Expect = 6.4
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +1
Query: 22 MGKRLQDIGVENTEENRRKYRQLLFSSDPAL--SENISGVILFHETLYQKTDDGTPLVSL 195
M +L+++ + E+ R K R+ + DP S IS V L + + G PL +
Sbjct: 1 MNNQLENVFRFDEEKERAKIRESPWKHDPEFFRSVKISAVALL--KMLRHVSQGMPLEVM 58
Query: 196 LEKRGIIPG---IKVDKGVVPLFGSE 264
+G + G I +D +P+ G+E
Sbjct: 59 GYVQGKVEGASLIILDSFALPVEGTE 84
>SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 364
Score = 25.0 bits (52), Expect = 6.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 342 QVALRIEDRPQHSIVPSHLGECQCVG 419
Q+ +D SIVP+H E C+G
Sbjct: 157 QILFLFKDHMNTSIVPAHDSEISCLG 182
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +1
Query: 322 KDGCHFAKWRCVLKIGRNTPSYQAILENANVLARYASICQSQRIVAIVEP 471
K CHF +C LK+ + + A+ N++ ++ + Q I A P
Sbjct: 148 KHSCHFNILKCFLKLLMSLSAKLAVSSNSSTVSSLELVSQIASIWAFDWP 197
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 24.6 bits (51), Expect = 8.4
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +2
Query: 185 LYLSWR-NAASSPVSRSTRVLSPC-SDLK 265
LYLSWR NA+ S S + +PC +D K
Sbjct: 1021 LYLSWRTNASFFYASSSLEIDTPCFNDFK 1049
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 24.6 bits (51), Expect = 8.4
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 413 CWLATPPSARVSVSWP*LS 469
C + TPP A+VSVS+ +S
Sbjct: 528 CLVVTPPEAKVSVSFEEIS 546
>SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 474
Score = 24.6 bits (51), Expect = 8.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 442 SGRWRRSEPTHWH 404
SG W S P HWH
Sbjct: 380 SGSWWISSPDHWH 392
>SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 24.6 bits (51), Expect = 8.4
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +3
Query: 144 PRNPVPEDR*WNSPCISPGETRHHPR-YQGRQ 236
PR PV +R W P + G R R Y+GR+
Sbjct: 78 PRRPVEHERNW-QPELKHGRERFRERDYEGRR 108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.136 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,392,992
Number of Sequences: 5004
Number of extensions: 53305
Number of successful extensions: 181
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 198176188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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