Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_P14
(500 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0) 249 9e-67
SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0) 249 9e-67
SB_22899| Best HMM Match : Glyco_transf_8 (HMM E-Value=9.5e-15) 31 0.40
SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_29909| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.8) 31 0.53
SB_12553| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_51702| Best HMM Match : SURF6 (HMM E-Value=4) 28 3.8
SB_44245| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_27819| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_2522| Best HMM Match : TFIIB (HMM E-Value=0.0018) 28 3.8
SB_17724| Best HMM Match : TFIIB (HMM E-Value=0.01) 28 3.8
SB_49917| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_42166| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6) 28 5.0
SB_37123| Best HMM Match : Extensin_2 (HMM E-Value=1.5) 28 5.0
SB_25110| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_17822| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_10411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_57147| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_53159| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_33988| Best HMM Match : TFIIB (HMM E-Value=0.0037) 27 6.6
SB_32366| Best HMM Match : Kinesin (HMM E-Value=0) 27 6.6
SB_20503| Best HMM Match : TFIIB (HMM E-Value=0.00035) 27 6.6
SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05) 27 6.6
SB_41913| Best HMM Match : Rap_GAP (HMM E-Value=1.9e-06) 27 6.6
SB_23648| Best HMM Match : Atracotoxin (HMM E-Value=0.22) 27 6.6
SB_23405| Best HMM Match : TFIIB (HMM E-Value=0.0037) 27 6.6
SB_16896| Best HMM Match : TFIIB (HMM E-Value=0.0037) 27 6.6
SB_55010| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_44307| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_44005| Best HMM Match : CUE (HMM E-Value=0.38) 27 8.7
SB_14263| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_10271| Best HMM Match : zf-CCHC (HMM E-Value=0.89) 27 8.7
SB_1075| Best HMM Match : rve (HMM E-Value=0.0089) 27 8.7
SB_57074| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_49844| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_13638| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 949
Score = 249 bits (610), Expect = 9e-67
Identities = 123/166 (74%), Positives = 134/166 (80%), Gaps = 1/166 (0%)
Frame = +1
Query: 1 ADESTGTMGKRLQDIGVENTEENRRKYRQLLFSSDPALSENISGVILFHETLYQKTDDGT 180
ADESTGTMGKRL +IGVENTEENRR YRQLLF+S +S ISGVILFHET+YQK DDGT
Sbjct: 30 ADESTGTMGKRLANIGVENTEENRRLYRQLLFTSGKEMSNAISGVILFHETVYQKADDGT 89
Query: 181 PLVSLLEKRGIIPGIKVDKGVVPLFGSE-DECTTQGLDDLAQRCAQYKKDGCHFAKWRCV 357
P V LL +GIIPGIKVDKGVV L G++ E TTQGLD L +RCAQYKKDGC FAKWRCV
Sbjct: 90 PFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQGLDGLGERCAQYKKDGCDFAKWRCV 149
Query: 358 LKIGRNTPSYQAILENANVLARYASICQSQRIVAIVEPEGLADGEH 495
LKI TPS A+ ENANVLARYASICQ +V IVEPE L DG+H
Sbjct: 150 LKITDYTPSELAMKENANVLARYASICQQNGLVPIVEPEVLCDGDH 195
>SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0)
Length = 304
Score = 249 bits (610), Expect = 9e-67
Identities = 123/166 (74%), Positives = 134/166 (80%), Gaps = 1/166 (0%)
Frame = +1
Query: 1 ADESTGTMGKRLQDIGVENTEENRRKYRQLLFSSDPALSENISGVILFHETLYQKTDDGT 180
ADESTGTMGKRL +IGVENTEENRR YRQLLF+S +S ISGVILFHET+YQK DDGT
Sbjct: 30 ADESTGTMGKRLANIGVENTEENRRLYRQLLFTSGKEMSNAISGVILFHETVYQKADDGT 89
Query: 181 PLVSLLEKRGIIPGIKVDKGVVPLFGSE-DECTTQGLDDLAQRCAQYKKDGCHFAKWRCV 357
P V LL +GIIPGIKVDKGVV L G++ E TTQGLD L +RCAQYKKDGC FAKWRCV
Sbjct: 90 PFVRLLRDQGIIPGIKVDKGVVVLAGTDAGETTTQGLDGLGERCAQYKKDGCDFAKWRCV 149
Query: 358 LKIGRNTPSYQAILENANVLARYASICQSQRIVAIVEPEGLADGEH 495
LKI TPS A+ ENANVLARYASICQ +V IVEPE L DG+H
Sbjct: 150 LKITDYTPSELAMKENANVLARYASICQQNGLVPIVEPEVLCDGDH 195
>SB_22899| Best HMM Match : Glyco_transf_8 (HMM E-Value=9.5e-15)
Length = 847
Score = 31.5 bits (68), Expect = 0.40
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 481 PNPQAQLWPRYADSGRWR 428
PN Q LW YAD+GRW+
Sbjct: 324 PNDQVLLWHLYADTGRWK 341
>SB_59586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 124 ISGVILFHETLYQKTDDGTPLVSLLEKR 207
+SG ++ +E L+Q DD TPLV +L +R
Sbjct: 103 LSGSVVSNEWLHQLMDDSTPLVQILAER 130
>SB_29909| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=1.8)
Length = 441
Score = 31.1 bits (67), Expect = 0.53
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -1
Query: 254 NRGTTPLSTLIPGMMPRFSRRDTRGVPSSVFWYRVSWKRITPEMFSESAGS 102
++ T+P++ I P F RR++ VPS V R S +P+ + S GS
Sbjct: 243 SKNTSPIAVTIRQYSPNFGRRNSDHVPSQVDSSRKSVVSFSPDSANGSDGS 293
>SB_12553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 30.7 bits (66), Expect = 0.71
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +2
Query: 95 SVLTRHSLRTFRE*FSSTKPCTRRQMM-ELPLYLSWRNAASSPVSRSTRVLSPCSDLKTS 271
SVLT+ S+ T R + T++ ++ E + W PV V++ CS L
Sbjct: 141 SVLTKRSVLTKRSVLTKRSVVTKQSVLTEQSVLTKWSVVTKRPVVTKRPVVTKCSVLTER 200
Query: 272 APLKVSMTWPSVALSTRRTAATLPSG 349
+ L ++ T R PSG
Sbjct: 201 SVLTKQSVVTKQSMLTMRPVVKRPSG 226
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 140 SSTKPCTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCS-DLKTSAPLKVSMTWPS-VAL 313
S K ++ ++LP+ +S + PVS +++ P S KT +P+ ++ P V+L
Sbjct: 1029 SGCKNPKKKNTLKLPVPVSLTSKTPGPVSLTSKTPGPVSLTSKTPSPVSLTSKTPGPVSL 1088
Query: 314 STRRTA-ATLPSGVAY*RSAATLHRTKP 394
S++ + +L S S T TKP
Sbjct: 1089 SSKTSGPVSLTSKTPGPVSLTTKQSTKP 1116
>SB_16236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2317
Score = 28.7 bits (61), Expect = 2.8
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 146 TKPCTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDL-KTSAPLKVSMTWPSVALSTR 322
+ P T + P +S + PV+ S+R +SP +T P++ T S S+
Sbjct: 865 SSPSTVSSVETTPSTVSTKPRTIFPVAASSRTISPVETTPETIPPVETKSTTISAIESSP 924
Query: 323 RTAATL 340
RTA+T+
Sbjct: 925 RTASTV 930
>SB_51702| Best HMM Match : SURF6 (HMM E-Value=4)
Length = 260
Score = 28.3 bits (60), Expect = 3.8
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Frame = +1
Query: 7 ESTGTMGKRLQDIGVENT-EENRRKYRQLLFSSDPALSENI---SGVILFHE-TLYQKTD 171
E TGT +QD G NT + ++ + + + S LS + GV++ E + QK D
Sbjct: 111 EGTGTDASEMQDSGAVNTCQSDKHVFTKHVAESKVVLSPSSHGKQGVLMMPEYVVGQKPD 170
Query: 172 DGTPLVSLLEKRGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKD 327
V+ E +G + + G+ L ++E + + + ++D
Sbjct: 171 KQKKKVTRDESQGSVKSQEKTVGITHLQVEQEEVEEEEISTTTLTAGENQRD 222
>SB_44245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 404
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 ISGVILFHETLYQKTDDGTPLVSLLEKR 207
+SG ++ +E YQ DD TP V +L +R
Sbjct: 27 LSGSVVSNEWWYQLMDDSTPSVQILAER 54
>SB_27819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 124 ISGVILFHETLYQKTDDGTPLVSLLEKR 207
+SG ++ +E YQ DD TP V +L +R
Sbjct: 152 LSGSVVSNEWWYQLMDDSTPSVQILAER 179
>SB_4415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 640
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 123 VLRECRVRTEQELTVFTAILLSVFDSNVLETLAHCTSG 10
V + C R + + V A++ VFD +V+E HC G
Sbjct: 332 VEKPCHCRDGESVQVNNAMVNVVFDGDVVEKPRHCRDG 369
>SB_2522| Best HMM Match : TFIIB (HMM E-Value=0.0018)
Length = 367
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 200 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 45
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 313 ARPQSFAVALTYYWVRLKGVNITLKKFSERTGVSELTIS-RKAREVATVLGTP 364
>SB_17724| Best HMM Match : TFIIB (HMM E-Value=0.01)
Length = 308
Score = 28.3 bits (60), Expect = 3.8
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 200 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 45
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 254 ARPQSFAVALTYYWVRLKGVNITLKKFSERTGVSELTIS-RKAREVATVLGTP 305
>SB_49917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 161 RRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVALSTRRTAATL 340
R Q++ P + SWRN+ + R ++ L + + AP +++ V + TR ATL
Sbjct: 14 RSQLVSHPPFASWRNSEEARTDRPSQQLRSLNG-EWDAPCSGALSAAGVVV-TRSVTATL 71
Query: 341 PS 346
S
Sbjct: 72 AS 73
>SB_42166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 116
Score = 27.9 bits (59), Expect = 5.0
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +2
Query: 143 STKPCTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVALSTR 322
+TKP T P + SWRN+ + R ++ L + + AP +++ V + TR
Sbjct: 36 TTKPVTDWPPYTHPPFASWRNSEEARTDRPSQQLRSLNG-EWDAPCSGALSAAGVVV-TR 93
Query: 323 RTAATLPS 346
ATL S
Sbjct: 94 SVTATLAS 101
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 307 CAQYKKDGCHFAKWRCVLKIGRNTPSYQAILENANVLARYASICQSQRIVAIVEPEGLAD 486
C ++D C+ C L +GR S Q +EN + +R + + QS V E +
Sbjct: 5881 CNLVRRDMCYTICGICYLHLGREVTSLQGSVENLS--SRCSDLSQSSSAVQSTTLESQLE 5938
Query: 487 G 489
G
Sbjct: 5939 G 5939
>SB_59124| Best HMM Match : Bac_luciferase (HMM E-Value=1.6)
Length = 1953
Score = 27.9 bits (59), Expect = 5.0
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 348 ALRIEDRPQHSIVPSHLGECQCVGSLRL-HL 437
A+++ + QH+ V S G+CQ G LRL HL
Sbjct: 111 AIQLPEPAQHNAVCSTSGKCQAGGELRLSHL 141
>SB_37123| Best HMM Match : Extensin_2 (HMM E-Value=1.5)
Length = 318
Score = 27.9 bits (59), Expect = 5.0
Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +2
Query: 140 SSTKPCTR-RQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVALS 316
+S+ P TR R + PL +W N +S SP + ++ ++ TW + +
Sbjct: 98 NSSSPLTRTRDISSSPLTQTWDNLSSPLTQTWDNSSSPLTQTWDNSSSPLTQTWDNSSSP 157
Query: 317 TRRT--AATLPSGVAY*RSAATLHRTKPSWRMPMCWLATPPSARVSVSWP*LS 469
+T ++ P + S++ L +T+ + P+ S+ ++ +W LS
Sbjct: 158 LTQTWDNSSSPLTRTWDNSSSPLTQTQDNSSSPLTQTQDISSSPLNQTWDNLS 210
>SB_25110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 161 RRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVALSTRRTAATL 340
R Q++ P + SWRN+ + R ++ L + + AP +++ V + TR ATL
Sbjct: 14 RSQLVSHPPFASWRNSEEARTDRPSQQLRSLNG-EWDAPCSGALSAAGVVV-TRSVTATL 71
Query: 341 PS 346
S
Sbjct: 72 AS 73
>SB_17822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 161 RRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVALSTRRTAATL 340
R Q++ P + SWRN+ + R ++ L + + AP +++ V + TR ATL
Sbjct: 14 RSQLVSHPPFASWRNSEEARTDRPSQQLRSLNG-EWDAPCSGALSAAGVVV-TRSVTATL 71
Query: 341 PS 346
S
Sbjct: 72 AS 73
>SB_10411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 27.9 bits (59), Expect = 5.0
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 161 RRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVALSTRRTAATL 340
R Q++ P + SWRN+ + R ++ L + + AP +++ V + TR ATL
Sbjct: 14 RSQLVSHPPFASWRNSEEARTDRPSQQLRSLNG-EWDAPCSGALSAAGVVV-TRSVTATL 71
Query: 341 PS 346
S
Sbjct: 72 AS 73
>SB_57147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 200 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 45
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 1205 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 1256
>SB_53159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1540
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -1
Query: 185 RGVPSS-VFWYRVSWKRITPEMFSESAGSEL 96
RGVPS+ + WY+ + IT E+ S GS+L
Sbjct: 23 RGVPSAHITWYKPGGQPITAEVKLISGGSQL 53
>SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 27.5 bits (58), Expect = 6.6
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +2
Query: 179 LPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVAL----STRRTAATLPS 346
LPLY S SSP+ +S+ + K+S P K S + S +L S ++++ S
Sbjct: 581 LPLYKSSALYKSSPLYKSSSLYKSSPLYKSSPPYKSSSLYKSSSLYKSSSLYKSSSLYES 640
Query: 347 GVAY*RSAATLHRTKPSWRMPMCWLATP 430
Y ++ L+++ P ++ + ++P
Sbjct: 641 PPLY--KSSPLYKSSPPYKSSSLYRSSP 666
>SB_33988| Best HMM Match : TFIIB (HMM E-Value=0.0037)
Length = 412
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 200 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 45
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 358 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 409
>SB_32366| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 1492
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 481 PNPQAQLWPRYADSGRWR 428
PN Q LW YAD G W+
Sbjct: 1253 PNDQRLLWHYYADRGLWK 1270
>SB_20503| Best HMM Match : TFIIB (HMM E-Value=0.00035)
Length = 308
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 200 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 45
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 254 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 305
>SB_53071| Best HMM Match : TSP_1 (HMM E-Value=4.3e-05)
Length = 755
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/66 (24%), Positives = 24/66 (36%)
Frame = -2
Query: 475 PQAQLWPRYADSGRWRRSEPTHWHSPRWLGTMECCGRSSIRNATWQSGSRPSCTERNAGP 296
P + P +G W R WH W + CGR S A + C ++
Sbjct: 200 PGRSVAPVPLTTGFWARFPVPTWHVTEWDTCSKTCGRGSQSRAVF-------CRKKTTSS 252
Query: 295 SHRDLE 278
SH ++
Sbjct: 253 SHETID 258
>SB_41913| Best HMM Match : Rap_GAP (HMM E-Value=1.9e-06)
Length = 1035
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 200 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 45
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 981 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 1032
>SB_23648| Best HMM Match : Atracotoxin (HMM E-Value=0.22)
Length = 224
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 200 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 45
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 170 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 221
>SB_23405| Best HMM Match : TFIIB (HMM E-Value=0.0037)
Length = 224
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 200 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 45
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 170 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGVSELTIS-RKAREVATVLGTP 221
>SB_16896| Best HMM Match : TFIIB (HMM E-Value=0.0037)
Length = 224
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -1
Query: 200 SRRDTRGVPSSVFWYRVSWKRITPEMFSESAG-SELNRS*RYLRRFSSVFSTP 45
+R + V + +W R+ IT + FSE G SEL S R R ++V TP
Sbjct: 170 ARPQSFAVALTYYWVRLKGVDITLKKFSERTGISELTIS-RKAREVATVLGTP 221
>SB_55010| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 155 CTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKV 286
CT+ + + +LSW+ S +S S LS LK AP V
Sbjct: 38 CTKLLGVHVDQHLSWKTHVDSLLSSSYGTLSMLRRLKNLAPFHV 81
>SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 124 ISGVILFHETLYQKTDDGTPLVSLLEKR 207
+SG ++ +E +Q DD TP V +L +R
Sbjct: 606 LSGSVISNEWWHQLMDDSTPSVQILSER 633
>SB_44307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 155 CTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKV 286
CT+ + + +LSW+ S +S S LS LK AP V
Sbjct: 23 CTKLLGVHVDQHLSWKTHVDSLLSSSYGTLSMLRRLKNLAPFHV 66
>SB_44005| Best HMM Match : CUE (HMM E-Value=0.38)
Length = 761
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 160 QKTDDGTPLVSLLEKRGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQ 303
+K DD +S E ++P K G+ CT +G+D L Q
Sbjct: 202 KKFDDNIIDLSFTEDLDVLPKTKSKGSYCSCEGNNTRCTNEGIDRLEQ 249
>SB_14263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 248
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 155 CTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKV 286
CT+ + + +LSW+ S +S S LS LK AP V
Sbjct: 55 CTKLLGVHVDQHLSWKTHVDSLLSSSYGTLSMLRRLKNLAPFHV 98
>SB_10271| Best HMM Match : zf-CCHC (HMM E-Value=0.89)
Length = 261
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 155 CTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVALSTRRTAA 334
CT + P + SWRN+ + R ++ L + + AP +++ V + TR A
Sbjct: 185 CTANGITTHPPFASWRNSEEARTDRPSQQLRSLNG-EWDAPCSGALSAAGVVV-TRSVTA 242
Query: 335 TLPS 346
TL S
Sbjct: 243 TLAS 246
>SB_1075| Best HMM Match : rve (HMM E-Value=0.0089)
Length = 1617
Score = 27.1 bits (57), Expect = 8.7
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -2
Query: 445 DSGRWRRSEPTHWHSPRWLGTMECCGRSSIRNATWQSGSRPS--CTERNAGPS 293
+S RW SEP++ + P+ L C GRSS T + P+ TE + PS
Sbjct: 198 ESRRWL-SEPSYGYWPQQLNLAVCPGRSSPSFLTMRLSPLPTPLATEESDLPS 249
>SB_57074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 27.1 bits (57), Expect = 8.7
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 182 PLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKVSMTWPSVALSTRRTAATLPS 346
P + SWRN+ + R ++ L +D + AP +++ V + TR ATL S
Sbjct: 3 PPFASWRNSEEARTDRPSQQLRSLND-EWDAPCSGALSAAGVVV-TRSVTATLAS 55
>SB_49844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 11 PLVQWASVSRTLESKTLRRIAVNTVNS 91
P+V W++V R ES AVN+V+S
Sbjct: 1 PVVDWSAVERMRESVISNMAAVNSVSS 27
>SB_13638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.1 bits (57), Expect = 8.7
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 155 CTRRQMMELPLYLSWRNAASSPVSRSTRVLSPCSDLKTSAPLKV 286
CT+ + + +LSW+ S +S S LS LK AP V
Sbjct: 26 CTKLLGVHVDQHLSWKTHVDSLLSSSYGTLSMLRRLKNLAPFHV 69
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.136 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,071,914
Number of Sequences: 59808
Number of extensions: 475607
Number of successful extensions: 1521
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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