Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_P11
(533 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 35 0.032
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical... 30 1.2
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical... 30 1.2
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 29 1.6
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z74033-6|CAF31474.1| 321|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 27 6.4
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 27 6.4
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 27 6.4
Z92834-6|CAB07391.1| 312|Caenorhabditis elegans Hypothetical pr... 27 8.5
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 27 8.5
U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with... 27 8.5
U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with... 27 8.5
AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-medi... 27 8.5
AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 35.1 bits (77), Expect = 0.032
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 54 FDVPSIINLVDIVNIQAFDYYTPERNP 134
FD+ +I+ + D +NI + DYY P +NP
Sbjct: 239 FDIENIVAVADFINIYSMDYYGPWKNP 265
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 33.1 bits (72), Expect = 0.13
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 54 FDVPSIINLVDIVNIQAFDYYTPERN 131
FD+ +I+ +VD +N+ + DYY P +N
Sbjct: 229 FDMNNIVQIVDFINVFSLDYYGPTQN 254
>Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical
protein ZK938.6 protein.
Length = 460
Score = 29.9 bits (64), Expect = 1.2
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 15 VISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPEEADYTDTDLLHRRTAILLQ 194
VIS++ + N + + N VD +NI +F+ Y + P+ Y +
Sbjct: 258 VISLVISRNVNHLSKLVEFSNFVDFINIYSFNSYLYQVGPDSPLYGGGS----------R 307
Query: 195 NADAPMNYWI-QNGAPTQQDLSLVISDHWTYVE 290
N D M Y+I + G P++ ++++S H TY E
Sbjct: 308 NVDEIMKYYICKTGQPSK--FNIIVSFHATYWE 338
>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
protein Y105E8A.24b protein.
Length = 1127
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 212 ELLDSKWCAYPTRLVLGHQ*PLDVRGSSSQSEV 310
E + +KW A R + Q P+ VR SSS S+V
Sbjct: 1080 EEIQTKWAALQARSIEQQQSPMHVRSSSSHSQV 1112
>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
protein Y105E8A.24a protein.
Length = 1161
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 212 ELLDSKWCAYPTRLVLGHQ*PLDVRGSSSQSEV 310
E + +KW A R + Q P+ VR SSS S+V
Sbjct: 1080 EEIQTKWAALQARSIEQQQSPMHVRSSSSHSQV 1112
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 54 FDVPSIINLVDIVNIQAFDYYTP 122
+ +P I+ VD VN+ DYY P
Sbjct: 253 YSIPDILKYVDFVNVFTMDYYGP 275
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 28.7 bits (61), Expect = 2.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 54 FDVPSIINLVDIVNIQAFDYY 116
+D+ I+N D +N+ +DYY
Sbjct: 1132 YDLKGILNYADFINVMTYDYY 1152
>Z74033-6|CAF31474.1| 321|Caenorhabditis elegans Hypothetical
protein F38B7.8 protein.
Length = 321
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 433 VLIGVNKFGANFWVA**TLNCGIRTTFTTLIGVY 332
+L+ +N+F A F+ + CGI+TT L +Y
Sbjct: 107 ILVAINRFIALFFPRYYNMICGIKTTLGLLTSIY 140
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 57 DVPSIINLVDIVNIQAFDYYTPERNPE 137
++ SI+N VD +NI Y+ P NP+
Sbjct: 168 NITSIVNNVDFLNIFTMGYFGPWPNPK 194
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.5 bits (58), Expect = 6.4
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +1
Query: 43 APFTLTSQAS*TWSTLSTSRHLTIIHLNVTPKRRTTLTPIYCTAEP 180
A T TS AS T +T STS H T + + TT T EP
Sbjct: 287 ATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEP 332
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.5 bits (58), Expect = 6.4
Identities = 18/46 (39%), Positives = 21/46 (45%)
Frame = +1
Query: 43 APFTLTSQAS*TWSTLSTSRHLTIIHLNVTPKRRTTLTPIYCTAEP 180
A T TS AS T +T STS H T + + TT T EP
Sbjct: 269 ATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEP 314
>Z92834-6|CAB07391.1| 312|Caenorhabditis elegans Hypothetical
protein F39B2.11 protein.
Length = 312
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 377 ELWYKDHLHHPYRRVSVELRK 315
+ WY HLH PY +E R+
Sbjct: 124 QYWYASHLHFPYNLYYLEKRR 144
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 54 FDVPSIINLVDIVNIQAFDYYTP 122
F + I+ VD +NI A DYY P
Sbjct: 246 FKMNEIVENVDFINIFAMDYYGP 268
>U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform a
protein.
Length = 2322
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 337 VYRWNSGNLHLALTRASTYVQWSLMTKD 254
V WN+ ++ ALT ST +WS +T D
Sbjct: 604 VLTWNNECVNQALTILSTATKWSELTSD 631
>U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform b
protein.
Length = 2019
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 337 VYRWNSGNLHLALTRASTYVQWSLMTKD 254
V WN+ ++ ALT ST +WS +T D
Sbjct: 604 VLTWNNECVNQALTILSTATKWSELTSD 631
>AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans
nonsense-mediated mRNA decay proteinSMG-1 protein.
Length = 2322
Score = 27.1 bits (57), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 337 VYRWNSGNLHLALTRASTYVQWSLMTKD 254
V WN+ ++ ALT ST +WS +T D
Sbjct: 604 VLTWNNECVNQALTILSTATKWSELTSD 631
>AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical
protein T10D4.3 protein.
Length = 410
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 39 NSSIYFDVPSIINLVDIVNIQAFDYYTPERN 131
N + +D+ +I + VD N+ + DYY P N
Sbjct: 205 NLELGYDLRTISSHVDFFNVHSMDYYGPWPN 235
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,861,026
Number of Sequences: 27780
Number of extensions: 282122
Number of successful extensions: 856
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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