Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P10
         (587 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   5.8  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +1

Query: 361 NAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTSYQYQQLSIPAY 540
           +A+     DK   +  + A  P   IS +   T+A+Q+ P   LT    YQ+     P Y
Sbjct: 121 SALQRARADKTYRRSYTHAKPPYSYISLI---TMAIQNSPQKMLTLSEIYQFIMDLFPFY 177

Query: 541 NR 546
            +
Sbjct: 178 RQ 179


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 154 QERGPSVSCQNVSWYIHR 101
           +E GP V C   +W  +R
Sbjct: 633 KEEGPKVVCYMTNWAFYR 650


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 460 VALQSLPSPQLTADTSYQYQQLSIPAY 540
           +A+++ P  +LT +  Y+Y   + P Y
Sbjct: 94  MAIRNSPEKRLTLNGIYEYIMRNFPYY 120


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,445
Number of Sequences: 336
Number of extensions: 3098
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)