Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P10
         (587 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006673-3|AAF39929.1|  861|Caenorhabditis elegans Hypothetical ...    29   1.9  
AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid deplet...    29   2.4  
AF039046-3|ABP57815.1|   51|Caenorhabditis elegans Caenacin (cae...    28   4.3  

>AC006673-3|AAF39929.1|  861|Caenorhabditis elegans Hypothetical
           protein K09D9.11 protein.
          Length = 861

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
 Frame = -2

Query: 295 TLKLSFQDCFP-----YSCLRREYQRHLFRPIIVLLLDTPRDAPMGSFHVFLQER 146
           T+  +F++ FP     ++ +++ YQ+H  +      ++ P+  P+ SFH++++ER
Sbjct: 595 TIPWNFKETFPDKSEQFAEIQKIYQKHSKK---AFRMNVPQKFPVSSFHIWIEER 646


>AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid depleted
           protein 3 protein.
          Length = 1599

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -1

Query: 476 SDCRATVPGLTLEISYTGTDANEDS*KAGLSTDSAFTAFV 357
           +DC  T+P LTLE++   T  N D+   G+     F  F+
Sbjct: 783 ADCLLTLPRLTLELTSKRTRDNIDNYVGGIHISGQFKGFM 822


>AF039046-3|ABP57815.1|   51|Caenorhabditis elegans Caenacin
           (caenorhabditis bacteriocin)protein 11 protein.
          Length = 51

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +1

Query: 460 VALQSLPSPQLTADTSYQYQQLSIPAYNRFGGDLLTVLI 576
           VAL +L S Q     +Y Y     P Y  +GG LL +LI
Sbjct: 10  VALLALSSAQYGYGYNYGYGAPMYPGYGGYGGGLLGLLI 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,658,945
Number of Sequences: 27780
Number of extensions: 286535
Number of successful extensions: 746
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)