BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_P09
(410 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 87 6e-20
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 86 1e-19
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 66 1e-13
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 66 2e-13
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 62 2e-12
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 56 1e-10
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 56 1e-10
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 23 0.040
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 26 0.14
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 1.4
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 3.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 9.5
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 20 9.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 9.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 9.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 20 9.5
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 87.4 bits (207), Expect = 6e-20
Identities = 43/136 (31%), Positives = 75/136 (55%)
Frame = +2
Query: 2 FVDSHVINKAFMMKMTKAATDPVLMNYYGIKVTDKSMVVIDWRKGVRRSLSEDDKYSYFT 181
F DS VI +A +KM++ ++ MN + + + K +R + K YF
Sbjct: 170 FFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYS----SKNMREYNDPEYKLDYFM 225
Query: 182 EDVDLNTYMYYLHMNYPYWMTDEVYGLNKERQGEILMYANSQLLARLRMERLSHKMCDXS 361
EDV+LN Y YY+ PYWM+ Y + KE +G++ + + QL+ R +ER+S+ + +
Sbjct: 226 EDVELNAYYYYMREMLPYWMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLERMSNDLGKTA 285
Query: 362 MFMWNEPVKNGYWAKI 409
F WN+P+ +G+++ I
Sbjct: 286 EFDWNKPINSGFYSTI 301
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 86.2 bits (204), Expect = 1e-19
Identities = 43/136 (31%), Positives = 75/136 (55%)
Frame = +2
Query: 2 FVDSHVINKAFMMKMTKAATDPVLMNYYGIKVTDKSMVVIDWRKGVRRSLSEDDKYSYFT 181
F DS VI +A +KM++ ++ MN + + + K +R + K YF
Sbjct: 170 FFDSSVIEEAQNLKMSRGSSVVTGMNNIETYIVNTNYS----SKYMREYNDPEYKLDYFM 225
Query: 182 EDVDLNTYMYYLHMNYPYWMTDEVYGLNKERQGEILMYANSQLLARLRMERLSHKMCDXS 361
EDV+LN Y YY+ PYWM+ Y + KE +G++ + + QL+ R +ER+S+ + +
Sbjct: 226 EDVELNAYYYYMREMLPYWMSSSQYHMPKEIRGQLYYFLHKQLMTRYFLERMSNDLGKTA 285
Query: 362 MFMWNEPVKNGYWAKI 409
F WN+P+ +G+++ I
Sbjct: 286 EFDWNKPINSGFYSTI 301
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 66.1 bits (154), Expect = 1e-13
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +2
Query: 158 DDKYSYFTEDVDLNTYMYYLHMNYPYWMTDEVYGLNKERQGEILMYANSQLLARLRMERL 337
++K +YF ED+ LNTY ++L +P+W+ + Y L + +GE +Y++ LL R +ERL
Sbjct: 217 ENKLNYFIEDIGLNTYYFFLRQAFPFWLPSKEYDL-PDYRGEEYLYSHKLLLNRYYLERL 275
Query: 338 SHKMCDXSMFMWNEPVKNGYW 400
S+ + F W +P GY+
Sbjct: 276 SNDLPYLEEFDWQKPFYPGYY 296
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 65.7 bits (153), Expect = 2e-13
Identities = 29/81 (35%), Positives = 48/81 (59%)
Frame = +2
Query: 158 DDKYSYFTEDVDLNTYMYYLHMNYPYWMTDEVYGLNKERQGEILMYANSQLLARLRMERL 337
++K YF ED+ LNTY ++L +P+W+ + Y L + +GE +Y++ LL R +ERL
Sbjct: 217 ENKLIYFIEDIGLNTYYFFLRQAFPFWLPSKEYDL-PDYRGEEYLYSHKLLLNRYYLERL 275
Query: 338 SHKMCDXSMFMWNEPVKNGYW 400
S+ + F W +P GY+
Sbjct: 276 SNDLPHLEEFDWQKPFYPGYY 296
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 62.1 bits (144), Expect = 2e-12
Identities = 26/88 (29%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +2
Query: 149 LSEDDKYSYFTEDVDLNTYMYYLHMNYPYWMTDEVYGLNKERQGEILMYANSQLLARLRM 328
L + + +Y+ ED+ +N + ++ H+ YP+ ++ +NK+R+GE+ Y + Q++AR
Sbjct: 190 LDVEHRVAYWREDIGINLHHWHWHLVYPF--EGDIRIVNKDRRGELFYYMHQQIMARYNC 247
Query: 329 ERLSHKMCDXSMFM-WNEPVKNGYWAKI 409
ERL +++ F+ W+EP+ Y+ K+
Sbjct: 248 ERLCNRLGRVKRFINWHEPIPEAYFPKL 275
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 56.4 bits (130), Expect = 1e-10
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +2
Query: 158 DDKYSYFTEDVDLNTYMYYLHMNYPYWMTDEVYGLNKERQGEILMYANSQLLARLRMERL 337
+ + +YFTEDV LN + + L+ NYP +M + R GE + + Q+L R +ERL
Sbjct: 216 EQRLNYFTEDVGLNHFYFMLNHNYPPFMLSNSLNFPQIR-GEFYFFLHKQVLNRYYLERL 274
Query: 338 SHKMCDXSMFMWNEPVKNGYW 400
S+ M + S + P+ GY+
Sbjct: 275 SNDMGEVSYVSLDHPIPTGYY 295
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 56.4 bits (130), Expect = 1e-10
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +2
Query: 158 DDKYSYFTEDVDLNTYMYYLHMNYPYWMTDEVYGLNKERQGEILMYANSQLLARLRMERL 337
+ + +YFTEDV LN + + L+ NYP +M + R GE + + Q+L R +ERL
Sbjct: 216 EQRLNYFTEDVGLNHFYFMLNHNYPPFMLSNSLNFPQIR-GEFYFFLHKQVLNRYYLERL 274
Query: 338 SHKMCDXSMFMWNEPVKNGYW 400
S+ M + S + P+ GY+
Sbjct: 275 SNDMGEVSYVSLDHPIPTGYY 295
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 23.4 bits (48), Expect(2) = 0.040
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 275 QGEILMYANSQLLARLRMERLSH 343
+G +Y + QLLAR + RLS+
Sbjct: 272 RGAQYLYLHQQLLARYELNRLSN 294
Score = 23.0 bits (47), Expect(2) = 0.040
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 149 LSEDDKY-SYFTEDVDLNTYMYYLHMNYPYWMTDE 250
LS D++ SYFT+D+ L YY +N ++ ++
Sbjct: 202 LSHDEQQLSYFTQDIGLAA--YYAQVNLAGYIQEQ 234
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 26.2 bits (55), Expect = 0.14
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +2
Query: 203 YMYYLHMNYPYWMTDEVYGLNKERQGEILMYA--NSQLLARLRM---ERLSHKMCDXSMF 367
Y+ LH++ P W++ + K + G++ + +S++ AR+ M + S D +
Sbjct: 329 YLQELHVDAPTWISSVTESVLKSKIGQVFLITILDSKVSARIEMNEDDNTSLVSLDKKQY 388
Query: 368 MW 373
W
Sbjct: 389 TW 390
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 23.0 bits (47), Expect = 1.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 115 NHTLISNFYPVIVHKHRVGGSFSHLHH 35
NHT+ P H H S HLH+
Sbjct: 340 NHTMGPTMGPPHHHHHHQTQSLQHLHY 366
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 3.1
Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 115 NHTLISNFYPVI-VHKHRVGGSFSHLH 38
++ L++N Y H H +G SH+H
Sbjct: 401 HNNLLNNVYSTPGPHHHTMGHGHSHIH 427
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 310 KLTIRVHEYLSLTLFVQTV 254
KLT+ V LSLT+F+ V
Sbjct: 225 KLTLGVTILLSLTVFLNLV 243
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 310 KLTIRVHEYLSLTLFVQTV 254
KLT+ V LSLT+F+ V
Sbjct: 225 KLTLGVTILLSLTVFLNLV 243
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 310 KLTIRVHEYLSLTLFVQTV 254
KLT+ V LSLT+F+ V
Sbjct: 225 KLTLGVTILLSLTVFLNLV 243
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 310 KLTIRVHEYLSLTLFVQTV 254
KLT+ V LSLT+F+ V
Sbjct: 225 KLTLGVTILLSLTVFLNLV 243
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 310 KLTIRVHEYLSLTLFVQTV 254
KLT+ V LSLT+F+ V
Sbjct: 225 KLTLGVTILLSLTVFLNLV 243
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.2 bits (40), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 310 KLTIRVHEYLSLTLFVQTV 254
KLT+ V LSLT+F+ V
Sbjct: 225 KLTLGVTILLSLTVFLNLV 243
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 20.2 bits (40), Expect = 9.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 146 SLSEDDKYSYFTEDVDLNTYMYY 214
SLS + KYS + + N +YY
Sbjct: 84 SLSNNYKYSNYNNYNNYNKKLYY 106
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 310 KLTIRVHEYLSLTLFVQTV 254
KLT+ V LSLT+F+ V
Sbjct: 293 KLTLGVTILLSLTVFLNLV 311
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 9.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 310 KLTIRVHEYLSLTLFVQTV 254
KLT+ V LSLT+F+ V
Sbjct: 293 KLTLGVTILLSLTVFLNLV 311
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 20.2 bits (40), Expect = 9.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +2
Query: 212 YLHMNYPYWMTDEVYGLNKERQGEILMYANSQ 307
YL +YP N+ RQG L Y + +
Sbjct: 106 YLKFSYPRMRAPSFICENETRQGLTLHYRSKR 137
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,914
Number of Sequences: 438
Number of extensions: 1917
Number of successful extensions: 27
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -