Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P08
         (497 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    27   0.071
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.29 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   2.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   2.0  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   2.7  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   3.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   4.7  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   6.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.1  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   8.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.1  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 27.5 bits (58), Expect = 0.071
 Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 10/76 (13%)
 Frame = +1

Query: 205 NGQNTQRFPE-CSEP-CING-VCTEGNQ---CVCNPGYSMDLTDRRCKPRCAGGCPNG-L 363
           +G N Q   E C+E  C+NG  C +G     C C PG++      R     +  C NG  
Sbjct: 16  SGINCQTNDEDCTETSCMNGGTCIDGINSYICTCKPGFTGSNCQNRINLCDSSPCLNGAT 75

Query: 364 CSGPN---LCICNMGY 402
           C        C C  GY
Sbjct: 76  CQDHTTHYTCHCPYGY 91


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 1   WLGGQLPGNQPNYPNPSQYEIMVMLPNGTITYQP 102
           WL  Q P N PN+  PS     V  P   +  +P
Sbjct: 24  WLNSQQPRNVPNFAAPST-STAVQRPQAILQVRP 56


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
 Frame = +1

Query: 247 CINGVCTEGNQCVCNPGYSMDLTDRRCKPRCAGGCPNGLCSGPNL----CICNMGY 402
           C+N +   G++C C PG++               C NG      +    CIC  G+
Sbjct: 44  CVN-LPGVGHRCQCQPGFTGKYCHENINDCKVNPCENGGTCVDKINAFQCICKEGW 98


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 22  GNQPNYPNPSQ 54
           G Q NYPNP Q
Sbjct: 347 GRQYNYPNPQQ 357


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 22  GNQPNYPNPSQ 54
           G Q NYPNP Q
Sbjct: 295 GRQYNYPNPQQ 305


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +2

Query: 296 DILWILPIEGASPV-VQVDVP 355
           DI  +LP +GASP+ + V +P
Sbjct: 183 DIALVLPTQGASPLPLLVPIP 203


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 10  GQLPGNQPNYPNPSQYEIMVML 75
           G+ P  Q N  NP+ YEI+  L
Sbjct: 362 GEPPCGQLNPDNPNVYEILEKL 383


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/29 (24%), Positives = 15/29 (51%)
 Frame = +2

Query: 305 WILPIEGASPVVQVDVPMDSVQDLIFAFV 391
           W +   G     Q D+P+D    ++++F+
Sbjct: 31  WAIYRPGIGRYAQEDLPVDLCTHIVYSFI 59


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 307 P*NIRDCRHIDCLP 266
           P N +DC   DC+P
Sbjct: 77  PYNTQDCYREDCIP 90


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 35  FGWFPGSCPP 6
           FG FPG  PP
Sbjct: 193 FGIFPGGAPP 202


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +2

Query: 305 WILPIEGASPVVQ 343
           W+ P +G SP+ +
Sbjct: 916 WVAPFDGNSPITR 928


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 4/21 (19%)
 Frame = -3

Query: 348 STCTTGLA----PSIGKIHRI 298
           +TC + LA    P +GK HRI
Sbjct: 97  NTCRSALALLLSPEVGKDHRI 117


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 147 IWLVWFMRLVERIRSWL 97
           IWL+ F  L+  + +W+
Sbjct: 122 IWLLIFAYLIPEVGTWI 138


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 147 IWLVWFMRLVERIRSWL 97
           IWL+ F  L+  + +W+
Sbjct: 122 IWLLIFAYLIPEVGTWI 138


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,934
Number of Sequences: 336
Number of extensions: 3524
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)