Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P07
         (578 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27983| Best HMM Match : PAN (HMM E-Value=0.0022)                    75   3e-14
SB_31891| Best HMM Match : No HMM Matches (HMM E-Value=.)              66   1e-11
SB_19356| Best HMM Match : Cucumo_2B (HMM E-Value=7.3)                 47   1e-05
SB_15136| Best HMM Match : Peptidase_S13 (HMM E-Value=0.27)            29   2.7  
SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078)          28   6.3  
SB_46504| Best HMM Match : DUF1373 (HMM E-Value=7.5)                   27   8.4  

>SB_27983| Best HMM Match : PAN (HMM E-Value=0.0022)
          Length = 616

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 50/134 (37%), Positives = 67/134 (50%), Gaps = 6/134 (4%)
 Frame = +1

Query: 115 LQKIWFTKYARHWTGLCKCSCAFENIFMAELKSDT------VLGLHSWLFFAKRELDRKA 276
           L KIWF  Y R   G  + S  FE++F+ E   D+      V G HSWL F  +E  R A
Sbjct: 7   LYKIWFYFYNR---GAYRDSSGFEHVFVGEKYDDSKSGKKIVKGYHSWLQFYLQEKRRDA 63

Query: 277 NYLGHIDKLELSGKGMILKQHSILSDTKDAPEVNMFVGTSPELETALYTLCFMARPDRPC 456
           +Y G+        +G+ LK      +  D    + F+GTSPE E +LYT CF  RP + C
Sbjct: 64  DYHGYYALSTSEPRGLKLKFDV---NNYDKVVSSFFLGTSPEFEFSLYTACFYLRPGQEC 120

Query: 457 KLRYNNIAFTIQTK 498
             R N+    I+TK
Sbjct: 121 TCRINSQTIKIRTK 134


>SB_31891| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 282

 Score = 66.5 bits (155), Expect = 1e-11
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
 Frame = +1

Query: 10  YINTILATGPIRTLMNFLVSKGLTQMNEYNEQVQLLQKIWFTKYARHWTGLCKCSCAFEN 189
           +I+ I  TGP+     FL  KGL   +    + +L Q +WF  Y R      K S  FE+
Sbjct: 90  FIDRIYDTGPMEIAHKFLAGKGLVPSDRPGFKKKLYQ-MWFELYQRTRGCRVKDSSGFEH 148

Query: 190 IFMAELK-SDTVLGLHSWLFFAKRELDRKANYLGHIDKLELSGKGMILKQHSILSDTKDA 366
           +F+ E +  + V+G H+W+ F  +E     +Y G            ++++       K+ 
Sbjct: 149 VFVGETRGKEEVIGFHNWIQFYLQEKAGVVDYKGFFPNRNSFNITPVMQKRMSTDAMKEC 208

Query: 367 --------------PEVNMFVGTSPELETALYTLCFMA 438
                         P  + F+GTSPE E ALYT+CF+A
Sbjct: 209 QLVTIQFSWKSGVKPIGSSFIGTSPEFEMALYTVCFLA 246


>SB_19356| Best HMM Match : Cucumo_2B (HMM E-Value=7.3)
          Length = 194

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 24/63 (38%), Positives = 32/63 (50%)
 Frame = +1

Query: 355 TKDAPEVNMFVGTSPELETALYTLCFMARPDRPCKLRYNNIAFTIQTKTLKSDNVLLIDT 534
           T   P    FVGTSPE E +LYT CF+  P+  C  + N     ++  T +     L+ T
Sbjct: 132 TVQKPIGGFFVGTSPEFELSLYTTCFLKYPNGKCTCQMN--GKKVKIVTYRDRRTSLVAT 189

Query: 535 AYP 543
           AYP
Sbjct: 190 AYP 192


>SB_15136| Best HMM Match : Peptidase_S13 (HMM E-Value=0.27)
          Length = 638

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = -1

Query: 563 LVDA*KNGYAVSISRTLSDLSVFVCMVKAMXXXXXXXXXXXRAIKHSVYRAVSNSGDV 390
           ++ A  NG  VSI+  L+ +++   +++AM            A+K ++ RA++N   V
Sbjct: 223 IIRAMANGSIVSIAGILAIVAIKTTIIRAMANGSIVAIAGILAVKTTIIRAMANGSIV 280


>SB_22890| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.00078)
          Length = 788

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 184 ENIFMAELKSDTVLGLHSWLFFAKRELDRKANYL 285
           EN+ + ELK D V+    W  F  +++D   N L
Sbjct: 506 ENLDLKELKDDGVIDYEEWKTFPTQDIDMYMNNL 539


>SB_46504| Best HMM Match : DUF1373 (HMM E-Value=7.5)
          Length = 293

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 404 NSGDVPTNMLTSGASFVSLKIECCFRIIPFPESSN 300
           +S DVP+  LTS  SF+  K +  F  I  PE+ +
Sbjct: 253 SSSDVPSAKLTSADSFLDSKYKPLFSFILRPEAGH 287


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,364,211
Number of Sequences: 59808
Number of extensions: 379108
Number of successful extensions: 746
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)