Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P06
         (403 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   1.3  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   1.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   1.7  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   6.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   9.2  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 300 PHDYLHRRLICREALASSRLMVKTQHSCPSQMY 202
           P D + RR++ +   A S ++ K+   C + +Y
Sbjct: 232 PFDTVRRRMMMQSGRAKSEILYKSTLHCWATIY 264


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = -2

Query: 300 PHDYLHRRLICREALASSRLMVKTQHSCPSQMY 202
           P D + RR++ +   A S ++ K+   C + +Y
Sbjct: 232 PFDTVRRRMMMQSGRAKSEILYKSTLHCWATIY 264


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = -1

Query: 202  YASLRSFIEVLSMASPKAVLLYSWSKK*NARTLQTAITANKYN 74
            +  LRS +E+L ++  + V    W    NAR ++ ++ +N ++
Sbjct: 886  FLPLRS-LEILRLSGNRLVTFPVWQVTLNARLVELSLGSNPWS 927


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 88  ANKYNLIMLTRPRVVDNQN 32
           AN  +LIM TR    DNQN
Sbjct: 572 ANVNDLIMNTRCANSDNQN 590


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 328 STSPKNLSISTRLPSPAP 275
           S  P NLS  +  PSP P
Sbjct: 871 SQQPLNLSKKSPSPSPRP 888


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,143
Number of Sequences: 438
Number of extensions: 2208
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10008927
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)