Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P03
         (611 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical ...   136   9e-33
Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical p...    31   0.86 
AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical ...    31   0.86 
AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine re...    31   0.86 
Z74034-1|CAA98479.1|  313|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U41109-1|ABC48251.1|  248|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AC006679-2|AAK84465.2|  425|Caenorhabditis elegans Ligand-gated ...    27   8.0  

>AC025715-7|AAK68443.1|  178|Caenorhabditis elegans Hypothetical
           protein Y38F2AR.2 protein.
          Length = 178

 Score =  136 bits (330), Expect = 9e-33
 Identities = 66/157 (42%), Positives = 99/157 (63%)
 Frame = +2

Query: 92  TKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFWRVHALEVSSALAWFVLVTAAS 271
           TKEEELLL  +S   STK +  FY NA I+S  P++LF+ VH +E+  +L  + L    +
Sbjct: 5   TKEEELLLSSYSATSSTKGNLFFYLNALIISIAPLYLFYGVHQMEIQDSLVVWGLSAVGT 64

Query: 272 TWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRKLADDKKMSRKEKDERILWKKNEVADY 451
            +LL+LA +N K  LKH             +S + A DKKM+ KEK+ER L++KNEVAD 
Sbjct: 65  AYLLSLACKNQKCLLKHQIVMKRGSAVEREISGQYAADKKMTVKEKEERALFRKNEVADT 124

Query: 452 EATTYAIFYNNALFLTIVILGSFYILRTFTPTVNYIV 562
           E+T  ++FY N+L+LTI+++ +F++L    P  N ++
Sbjct: 125 ESTYLSVFYTNSLYLTIMLVSAFFLLANVAPVFNLLI 161


>Z81571-11|CAC35914.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 142 KIIGSVLWKCFHSICYSNMVV 204
           K IGS+ WKCFH IC   +V+
Sbjct: 413 KRIGSI-WKCFHKICQKRLVM 432


>AL132848-7|CAC35915.1| 1579|Caenorhabditis elegans Hypothetical
           protein M01G12.12 protein.
          Length = 1579

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 142 KIIGSVLWKCFHSICYSNMVV 204
           K IGS+ WKCFH IC   +V+
Sbjct: 413 KRIGSI-WKCFHKICQKRLVM 432


>AF016445-1|AAC69057.2|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein132 protein.
          Length = 367

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 386 KKMSRKEKDERILWKKNEVADYEATTYAIFYNNALF 493
           K++ + EK  ++    N+  DY  TT  +FYN   F
Sbjct: 246 KEIRKAEKRRKVSTSFNKTKDYRRTTQLVFYNTIFF 281


>Z74034-1|CAA98479.1|  313|Caenorhabditis elegans Hypothetical
           protein F43A11.1 protein.
          Length = 313

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = +1

Query: 145 IIGSVLWKCFHSICYSNMVVLEGACSGSELGSCMVCFSDRCEYL 276
           I G+++W+C HS+     V L    + S+    MV F+DR  +L
Sbjct: 240 ISGTLIWECLHSV--DGFVRLIFVFTASKFRFIMVIFNDRLSFL 281


>Z81571-5|CAB04615.1|  419|Caenorhabditis elegans Hypothetical
           protein M01G12.6 protein.
          Length = 419

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 386 KKMSRKEKDERILWKKNEVADYEATTYAIFYNNALF 493
           K+M +  +++R L    +  DY  TT  +FYN   F
Sbjct: 306 KEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTLFF 341


>Z81571-3|CAB04613.1|  352|Caenorhabditis elegans Hypothetical
           protein M01G12.4 protein.
          Length = 352

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 386 KKMSRKEKDERILWKKNEVADYEATTYAIFYNNALF 493
           K+M +  +++R L    +  DY  TT  +FYN   F
Sbjct: 239 KEMHKATENQRRLTSSKKTIDYNKTTRLVFYNTLFF 274


>U41109-1|ABC48251.1|  248|Caenorhabditis elegans Hypothetical
           protein F52E1.5 protein.
          Length = 248

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
 Frame = +1

Query: 184 CYSNMVVLEGACSGSELG--SCMVCFSD-RCEYLVTCTGI 294
           CY +     G C GSELG   C  C ++ +C   + C G+
Sbjct: 133 CYKDSECPSGKCFGSELGLCDCNACITNKKCSSDLDCGGL 172


>Z35604-3|CAA84679.1|  352|Caenorhabditis elegans Hypothetical
           protein ZK1058.3 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = +2

Query: 83  KAFTKEEELLLQDFSRNVSTKSSALFYGNAFIVSAIPIWLFW 208
           K F K  +++L D+    + K   +   N      +P W FW
Sbjct: 189 KHFEKHGKVMLMDYLEQETLKKERIIMRNEHWTWLVPYWAFW 230


>U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical
           protein F37A4.3 protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +2

Query: 389 KMSRKEKDERILWKKNEVADYEATTYAIFYNNALFLTIVILG 514
           ++ +  +++++ W     A+YEA  +  ++N +LFLT+   G
Sbjct: 15  RVGKLMRNDKLAWS----AEYEAKKFKFYHNTSLFLTLQSTG 52


>AC006679-2|AAK84465.2|  425|Caenorhabditis elegans Ligand-gated ion
           channel protein 12 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3

Query: 51  YKNIQCQAKEIKHSRRKKSYCCRILVVMCP 140
           Y+++QC  K  K  RRK  Y   I+V++ P
Sbjct: 215 YRSVQCNEKSFKEVRRKPLY--YIVVILIP 242


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,180,046
Number of Sequences: 27780
Number of extensions: 305604
Number of successful extensions: 962
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)