Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_P03
         (611 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g27473.1 68416.m03434 DC1 domain-containing protein contains ...    29   3.2  
At4g23060.1 68417.m03325 calmodulin-binding family protein conta...    27   9.8  
At4g02190.1 68417.m00291 DC1 domain-containing protein contains ...    27   9.8  
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul...    27   9.8  
At2g35200.1 68415.m04317 expressed protein                             27   9.8  
At2g14800.1 68415.m01677 hypothetical protein                          27   9.8  
At1g59865.2 68414.m06744 expressed protein                             27   9.8  

>At3g27473.1 68416.m03434 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 662

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = -1

Query: 443 PLHSFSKEFFHLSPS-CSFFYHQQVSETFPERQHLLFEQQLDVLVE 309
           P+ S++  F+  S S C FF H++ +    +++H L  Q LD+ ++
Sbjct: 396 PIGSYT--FYKCSKSYCGFFLHERCANLATKKRHFLSPQPLDLSLQ 439


>At4g23060.1 68417.m03325 calmodulin-binding family protein contains
           Pfam profile PF00612: IQ calmodulin-binding motif
          Length = 543

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 318 FS*NLVLRYASASNQVLAAVTKTNHARAELTSRACTLQNN 199
           +S +L+L  A  S  V A     + +  E+TS+ CT +N+
Sbjct: 387 YSSHLILDNAGLSEPVFATPFSPSSSHEEITSQFCTAENS 426


>At4g02190.1 68417.m00291 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 659

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 437 HSFSKEFFHLSPSCSFFYHQQVSETFPER-QHLLFEQQL 324
           HS   E F+    C F  HQ  ++ FP+R +H+L  ++L
Sbjct: 406 HSVCLESFYGCMDCDFILHQNCAK-FPKRKRHVLHNERL 443


>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
           regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
           phosphatases pleiotropic regulator PRL2 {Arabidopsis
           thaliana}, GB:Q39190 from [Arabidopsis thaliana];
           contains Pfam PF00400: WD domain, G-beta repeat (7
           copies, 1 weak)
          Length = 479

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +1

Query: 163 WKCFHSICYSNMVVLEGACSGSELGSCMVCFSDRCEYLVTCTG 291
           WK  H+   +  +V  G+   SE G    C+      LVTC G
Sbjct: 407 WKSGHNFQRAETIVQPGSLE-SEAGIYAACYDQTGSRLVTCEG 448


>At2g35200.1 68415.m04317 expressed protein
          Length = 201

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 76  RK*SIHEGRRAIAAGF*S*CVHKIIGSVLWKCFHSI 183
           +K S HEGR    AG    C+H+ + S+   C H +
Sbjct: 21  QKCSRHEGRFVCVAGVCPYCLHERLSSLCPDCAHDL 56


>At2g14800.1 68415.m01677 hypothetical protein
          Length = 580

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 494 GTRHYYKKWHML*LHNQPLHSFSKEFFH--LSPSCSFFYHQQ 375
           G  HY   WH   ++ Q L+SF  E +   ++ +  F +H+Q
Sbjct: 429 GNHHYKLSWHFKLIYWQFLYSFKTELYEEAVTGTEHFQHHEQ 470


>At1g59865.2 68414.m06744 expressed protein
          Length = 115

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 15/49 (30%), Positives = 19/49 (38%)
 Frame = -1

Query: 482 YYKKWHML*LHNQPLHSFSKEFFHLSPSCSFFYHQQVSETFPERQHLLF 336
           ++    ML +   P  S+    F  S    FF H   S  FPE    LF
Sbjct: 57  FFASTFMLPVSASPTLSYKSSLFSSSSLSVFFIHASSSSHFPEANLYLF 105


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,076,996
Number of Sequences: 28952
Number of extensions: 269881
Number of successful extensions: 793
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)