Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_P02
(673 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical p... 29 3.0
L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-lik... 29 3.0
L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-lik... 29 3.0
U80455-4|AAY55873.2| 315|Caenorhabditis elegans Hypothetical pr... 28 5.3
AL031633-16|CAA21028.1| 374|Caenorhabditis elegans Hypothetical... 28 5.3
AF022970-1|AAB69895.1| 142|Caenorhabditis elegans Hypothetical ... 28 5.3
AF016678-7|AAB66154.3| 340|Caenorhabditis elegans Serpentine re... 28 5.3
AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine re... 28 5.3
Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical pr... 28 6.9
U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical pr... 27 9.2
>Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Frame = +1
Query: 61 VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVVPLL--KERRGEWY 234
V T ++HY AS Y Y + Y H T K +GG V ++ G Y
Sbjct: 242 VTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAVKIIGWGVENGVDY 299
Query: 235 WFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 327
W + T + + ++ G E ++ GNVV
Sbjct: 300 WLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Frame = +1
Query: 61 VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVVPLL--KERRGEWY 234
V T ++HY AS Y Y + Y H T K +GG V ++ G Y
Sbjct: 242 VTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAVKIIGWGVENGVDY 299
Query: 235 WFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 327
W + T + + ++ G E ++ GNVV
Sbjct: 300 WLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Frame = +1
Query: 61 VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVVPLL--KERRGEWY 234
V T ++HY AS Y Y + Y H T K +GG V ++ G Y
Sbjct: 242 VTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAVKIIGWGVENGVDY 299
Query: 235 WFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 327
W + T + + ++ G E ++ GNVV
Sbjct: 300 WLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Frame = +1
Query: 61 VIRSNTTVWHYHCQSASMSYYLHDYSLNAHYYYHHLTYNKWLGGDVVPLL--KERRGEWY 234
V T ++HY AS Y Y + Y H T K +GG V ++ G Y
Sbjct: 242 VTEIQTEIYHYGPVEASYKVYEDFYHYKSGVY--HYTSGKLVGGHAVKIIGWGVENGVDY 299
Query: 235 WFVHKQLVTRYYME---RLSNGFGEIGELSGNVV 327
W + T + + ++ G E ++ GNVV
Sbjct: 300 WLIANSWGTSFGEKGFFKIRRGTNEC-QIEGNVV 332
>U80455-4|AAY55873.2| 315|Caenorhabditis elegans Hypothetical
protein T01D1.7 protein.
Length = 315
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/99 (22%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +2
Query: 221 VANGTGSYTNNL*HVTIWKDFLMDLVKSVNLVVTS*TKATILDTCIITVYHIQLDLIIST 400
VANG +YTNN + + + + ++ + L+ S +T Y +++ + S
Sbjct: 144 VANGKWAYTNNNLTLVLQRSIAISIIGTYELIGIS--------MSFLTAYRLKMYGMRSK 195
Query: 401 SIIQSIWVN---LKK*RITKDVYVMELKMVISLTALVIM 508
+ WV+ +K R ++V L +++ + A++IM
Sbjct: 196 KNEKVSWVSVLEMKVSRFQNLIFVTSLHILVDIVAMLIM 234
>AL031633-16|CAA21028.1| 374|Caenorhabditis elegans Hypothetical
protein Y39A1A.16 protein.
Length = 374
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 481 NHFQFHHVDVFRNPLFFQ 428
NHF++H +D F PLF+Q
Sbjct: 70 NHFEYH-IDKFHQPLFYQ 86
>AF022970-1|AAB69895.1| 142|Caenorhabditis elegans Hypothetical
protein F13A2.1 protein.
Length = 142
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 352 MYHNGIPYPVRPNHFHL-DHPEYLGELEKIKDYERRLRDGIEN 477
M NG P+P HFH+ D + L ELE +D E R + +N
Sbjct: 29 MVLNGTPFPDILRHFHVSDFSKELAELEIKQDAEFRKKSLWQN 71
>AF016678-7|AAB66154.3| 340|Caenorhabditis elegans Serpentine
receptor, class i protein45 protein.
Length = 340
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 349 YMYHNGIPYPVRPNHFHLDHPEYLGELEKIKDY 447
+ YH GI + P +L +PE+ E +K++
Sbjct: 165 FWYHAGIAEDLLPGFVNLTYPEFKAEFSNLKNF 197
>AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine
receptor, class t protein70 protein.
Length = 323
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 63 Y*VEYYCLALPLPKRFYVLLLT 128
Y V Y+C+ALPL F+VL+ T
Sbjct: 15 YGVAYFCIALPLFPVFFVLMKT 36
>Z81132-9|CAB03438.1| 320|Caenorhabditis elegans Hypothetical
protein T26E4.11 protein.
Length = 320
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 375 IWYTVMIHVSKIVAFVYDVTTKFTDFTKS 289
+W V + + + V Y + TK DFT S
Sbjct: 99 VWLAVSLAILRAVVIKYPINTKIQDFTSS 127
>U58746-2|AAB00622.2| 283|Caenorhabditis elegans Hypothetical
protein R05G6.7 protein.
Length = 283
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +1
Query: 292 FGEIGELSGNVVNEGYNFGYM 354
F ++G+ + ++ N+GYNFG++
Sbjct: 6 FADLGKSAKDLFNKGYNFGFL 26
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,551,412
Number of Sequences: 27780
Number of extensions: 340883
Number of successful extensions: 1077
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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