Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_P01
(613 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28) 107 7e-24
SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0) 106 1e-23
SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0) 50 2e-06
SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03) 46 2e-05
SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034) 41 7e-04
SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11) 40 0.002
SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042) 36 0.020
SB_16411| Best HMM Match : DUF791 (HMM E-Value=0) 35 0.060
SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15) 32 0.32
SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_48778| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011) 31 0.56
SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0) 31 0.74
SB_51293| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_28392| Best HMM Match : Exo_endo_phos (HMM E-Value=0.77) 31 0.74
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058) 30 1.7
SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04) 29 2.2
SB_19373| Best HMM Match : MFS_1 (HMM E-Value=3.36312e-44) 29 2.2
SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015) 29 2.2
SB_23581| Best HMM Match : HEAT (HMM E-Value=6.1e-11) 24 2.7
SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06) 29 3.0
SB_22037| Best HMM Match : Xan_ur_permease (HMM E-Value=2e-07) 29 3.0
SB_11981| Best HMM Match : CH (HMM E-Value=0.00075) 29 3.0
SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_957| Best HMM Match : Lactamase_B (HMM E-Value=0.38) 27 9.1
SB_14179| Best HMM Match : E-MAP-115 (HMM E-Value=2.8) 27 9.1
>SB_2499| Best HMM Match : Sugar_tr (HMM E-Value=1e-28)
Length = 456
Score = 107 bits (257), Expect = 7e-24
Identities = 54/155 (34%), Positives = 89/155 (57%)
Frame = +1
Query: 13 WRQFIFGGVANIAIACTGYMMGWTSPVNGKLNITDESPLDRPVTNDELSWIGSLVTVGAI 192
W ++ +A + GY MG++S +L +++ D + DE++W GSL+ +GA+
Sbjct: 38 WAVWMATFIAALGPLSFGYCMGYSSAATTQLE--NKNATDLYLNADEITWFGSLLNIGAM 95
Query: 193 FGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFWGLAVGMLFTIT 372
G + GF IGRK+ LI +S+P G++L+ +N M+ AGR GL VGM
Sbjct: 96 LGGPIQGFLIDLIGRKFALILTSVPFCSGWLLIGFGKNAAMLNAGRFMSGLGVGMASLNV 155
Query: 373 PMYCAEIATDDSRGALGSFLQVFVVIGFLLVYSVG 477
P+Y +E A+ +RGA+GS Q+ + G L+ Y++G
Sbjct: 156 PVYISETASFSNRGAMGSINQLGITAGILISYAIG 190
>SB_16011| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 512
Score = 106 bits (255), Expect = 1e-23
Identities = 60/172 (34%), Positives = 94/172 (54%)
Frame = +1
Query: 64 GYMMGWTSPVNGKLNITDESPLDRPVTNDELSWIGSLVTVGAIFGPFVGGFAASTIGRKW 243
G+ +G++S + ++ ES +T + SW SLVT+GAI G +GG+ GRK
Sbjct: 59 GFCLGYSS--SALEDLIAESKESVKLTVSQGSWFSSLVTLGAILGAPLGGWTLEYFGRKG 116
Query: 244 GLISSSLPMSIGFILVAAARNIGMIYAGRVFWGLAVGMLFTITPMYCAEIATDDSRGALG 423
+++ ++P +G++L+A A + M+Y GR GLAVGM+ P+Y AEI++ RG LG
Sbjct: 117 TIMACAVPFEVGWMLIAYANSHYMLYIGRFITGLAVGMVSLTVPVYIAEISSPSLRGMLG 176
Query: 424 SFLQVFVVIGFLLVYSVGPFVSYSVVQYVGLAXXXXXXXXXXXAPETPIYHL 579
S Q+ V +G LL YS+G + + + G PETP + L
Sbjct: 177 SVNQLAVTMGLLLAYSMGVVLKWRWLACSGAIFPALLVVLMFFVPETPRWSL 228
>SB_8709| Best HMM Match : Sugar_tr (HMM E-Value=0)
Length = 493
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Frame = +1
Query: 178 TVG-AIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFWGLAVG 354
T+G AI G +GG ++GRK L+ S + G +++ A ++ GR+ GL +G
Sbjct: 96 TIGTAIVGAVLGGILNDSLGRKPVLVLCSGVFTAGAVVMGVAGTKHVLLVGRLVIGLGIG 155
Query: 355 MLFTITPMYCAEIATDDSRGALGSFLQVFVVIGFLLVYSVGPFVSY 492
P+Y AE A RG L + +F+ G + V +Y
Sbjct: 156 GASMTVPIYVAEAAPSSMRGKLVTLNNLFITGGQFIASVVDGIFAY 201
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/69 (23%), Positives = 29/69 (42%)
Frame = +1
Query: 160 WIGSLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFW 339
W+ + + G VG F IGR+ L+ S + + L+ A + M + +V
Sbjct: 332 WLAAAIAFGNTLFTIVGIFLVERIGRRKLLLGSLAGVILSLFLLGGAFYLAMQHNPKVST 391
Query: 340 GLAVGMLFT 366
+ +FT
Sbjct: 392 AETINPVFT 400
>SB_7879| Best HMM Match : Sugar_tr (HMM E-Value=0.03)
Length = 201
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Frame = +1
Query: 190 IFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAA---ARNIGMIYAGRVFWGLAVGML 360
+ G G A+ GRK L++++ +G +L+ A+ ++ GR G+ GM
Sbjct: 1 MIGALAGPLFANRFGRKRSLLANNGLAIVGALLMFLSYFAKTSPLLTVGRFVIGINCGMN 60
Query: 361 FTITPMYCAEIATDDSRGALGSFLQVFVVIGFLLVYSVG----PFVSYSVVQYVGL 516
I P+Y +E+A RG+LG+ Q +V G L+ + G + S S+ + VG+
Sbjct: 61 TAIAPIYLSELAPIHLRGSLGTLNQFGIVSGLLVGFIFGLKQVLYYSTSIFEKVGV 116
>SB_18704| Best HMM Match : MFS_1 (HMM E-Value=0.034)
Length = 363
Score = 41.1 bits (92), Expect = 7e-04
Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 1/150 (0%)
Frame = +1
Query: 163 IGSLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFWG 342
+ S+ VG +FG F+ G + GRK L S + FI + + + F G
Sbjct: 151 VQSMYFVGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILIFFAG 210
Query: 343 LAVGMLFTITPMYCAEIATDDSRGALGSFLQVFVVIGFLLVYSVGPFV-SYSVVQYVGLA 519
L++ E+ D R G ++F G+LL+ V F+ + +G A
Sbjct: 211 LSLASSIACQYTLIIEMIGPDHRTIAGIINELFWKAGWLLIILVAYFIRDWRTFMLIGAA 270
Query: 520 XXXXXXXXXXXAPETPIYHLYKGDVDSAGE 609
E+P + L KG +D A E
Sbjct: 271 PGLAILLFWKWIFESPRWLLTKGRLDEAHE 300
>SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11)
Length = 302
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 1/150 (0%)
Frame = +1
Query: 163 IGSLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFWG 342
+ S+ VG +FG + G + GRK L S + FI + + + F G
Sbjct: 57 VQSMYFVGYLFGSLLSGTLSDAFGRKISLTVSVALQAAAFIGASFVTSHTALIILIFFAG 116
Query: 343 LAVGMLFTITPMYCAEIATDDSRGALGSFLQVFVVIGFLLVYSVGPFV-SYSVVQYVGLA 519
L++ E+ D R G ++F G+LL+ V F+ + +G A
Sbjct: 117 LSIASSIACQYTLIIEMIGPDHRTIAGIINELFWKAGWLLIILVAYFIRDWRTFMLIGAA 176
Query: 520 XXXXXXXXXXXAPETPIYHLYKGDVDSAGE 609
E+P + + KG +D A E
Sbjct: 177 PGLAILLFWKWIFESPRWLITKGRLDEAHE 206
>SB_1462| Best HMM Match : MFS_1 (HMM E-Value=0.042)
Length = 277
Score = 36.3 bits (80), Expect = 0.020
Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Frame = +1
Query: 163 IGSLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFWG 342
+ S+ VG +FG F+ G + GRK L S + FI + + + F G
Sbjct: 148 VQSMYFVGYLFGSFLSGTVSDAFGRKITLTVSVALQAAAFIGASFVTSHIALIILLFFAG 207
Query: 343 LAVGMLFTITPMYCAEIATDDSRGALGSFLQVFVVIGFLLVYSVGPFV-SYSVVQYVGLA 519
L++ E+ D R G ++F G+LL+ V F+ + + +G A
Sbjct: 208 LSLASSIACQYTLIIEMIGPDHRTIAGIINELFWKAGWLLIILVAYFIRDWRIFMLIGAA 267
>SB_16411| Best HMM Match : DUF791 (HMM E-Value=0)
Length = 445
Score = 34.7 bits (76), Expect = 0.060
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1
Query: 190 IFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFWGLAVGMLFT 366
IFG G+ A+ GRK + ++ S+ L +RN G++ GRV G++ +LFT
Sbjct: 87 IFGTS-SGYLANAFGRKKACVLFTILYSV-CCLTKLSRNYGILIFGRVLGGISTSLLFT 143
>SB_18740| Best HMM Match : MFS_1 (HMM E-Value=1.1e-15)
Length = 839
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/96 (19%), Positives = 41/96 (42%)
Frame = +1
Query: 169 SLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFWGLA 348
++ G + G V + GR+ G+ S +++ + + + R G+A
Sbjct: 123 AMYMAGLLVGSLVFSAVSDRFGRRIGVFISIALLAVCGTTSGFSNCLSLFILLRFVTGMA 182
Query: 349 VGMLFTITPMYCAEIATDDSRGALGSFLQVFVVIGF 456
+ ++C E+ + + R A+G +FV +GF
Sbjct: 183 NAGCLLVRYVFCMELISINHRTAVGFLTNIFVSLGF 218
>SB_896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 968
Score = 31.9 bits (69), Expect = 0.42
Identities = 25/108 (23%), Positives = 44/108 (40%)
Frame = +1
Query: 163 IGSLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFWG 342
+ S G + G VGG+A+ GR+ L+ S M+I A ++ R G
Sbjct: 630 VQSCFFAGMLIGSLVGGWASDRFGRRLCLLVGSAIMTILSFGTFFADCPSLLALLRFGVG 689
Query: 343 LAVGMLFTITPMYCAEIATDDSRGALGSFLQVFVVIGFLLVYSVGPFV 486
A+ + +Y E+ +R G F +G +L ++ F+
Sbjct: 690 FALASVMVCQYVYVIELVGPKARTMSGKVQDFFWDLGDILSFTCAYFI 737
>SB_48778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1165
Score = 31.9 bits (69), Expect = 0.42
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 316 IYAGRVFWGLAVGMLFTITPMYCAEIATDDS--RGALGSFLQVFVVIGFLLVYSVGPFVS 489
I VF+GL V + T A++A ++S RG G ++++ V+GF V+ G +
Sbjct: 972 IIVDAVFYGLTVKAIKTTASQ--AQMAAENSKRRGHFGIYVRLASVMGFTWVFGFGAALL 1029
Query: 490 YSVVQYV 510
+S + YV
Sbjct: 1030 WSPLWYV 1036
>SB_11070| Best HMM Match : Sugar_tr (HMM E-Value=0.00011)
Length = 468
Score = 31.5 bits (68), Expect = 0.56
Identities = 25/108 (23%), Positives = 44/108 (40%)
Frame = +1
Query: 163 IGSLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFWG 342
+ S G + G VGG+A+ GR+ L+ S M+I A ++ R G
Sbjct: 117 VQSCFFAGMLIGSLVGGWASDRFGRRLCLLVGSAIMTILSFGTFFADCPSLLALLRFGVG 176
Query: 343 LAVGMLFTITPMYCAEIATDDSRGALGSFLQVFVVIGFLLVYSVGPFV 486
A+ + +Y E+ +R G F +G +L ++ F+
Sbjct: 177 FALASVMVCQYVYVIELVGPKARTMSGKVQDFFWDLGDVLSFTCAYFI 224
>SB_52655| Best HMM Match : MFS_1 (HMM E-Value=0)
Length = 839
Score = 31.1 bits (67), Expect = 0.74
Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +1
Query: 142 TNDELSWIGSLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAAR-NIGMI 318
+ +++W+GS+ F + G + + + SL I +L + + ++ +
Sbjct: 443 SRQKIAWVGSITQCLTFFASPLAGLLIGKLSFRVTAVLGSLTCCISLVLTSFTKASLHIF 502
Query: 319 YAGRVFWGLAVGMLFTITPMYCAEIATDDSRGALGSFLQVFVVIGFL 459
++ V +GL LF ++ +Y + RG FL + +G L
Sbjct: 503 FSYSVLYGLG-SCLFYMSCVYAVAEYFEKRRGLALGFLTSGISVGVL 548
>SB_51293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 31.1 bits (67), Expect = 0.74
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Frame = +1
Query: 292 AAARNIGMIYAGRVFWGLAVGMLFTITPMYCAEIATDDSRGALGSFLQVFVVIGFLLVYS 471
A A + + R F G+A + +Y EI +R A+G + +F+V+G L +
Sbjct: 8 AFANTLTLFAVMRFFCGMATAGCLLVRFVYSMEITNLANRTAMGIMMNLFIVLGALTLTL 67
Query: 472 VGPFV-SYSVVQYVGLAXXXXXXXXXXXAPETPIYHLYKGDVDSA 603
+ V + + + PETP + + KG + A
Sbjct: 68 IAYLVRDFRYLMLSCVLPGIPPLLLWKWIPETPPWLIAKGKLPEA 112
>SB_28392| Best HMM Match : Exo_endo_phos (HMM E-Value=0.77)
Length = 549
Score = 31.1 bits (67), Expect = 0.74
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -3
Query: 431 RNDPRAPRLSSVAISAQYIGVIVNSIPTARPQNTRPAYIIPILRAAATNINPMDMGSDEL 252
R PR+ R +A + V V+S P+ RP+NTR ++P+ A N+ P+ DEL
Sbjct: 82 RKPPRSKRKQKKKETANHTSV-VDSPPSDRPRNTR---MVPVTLMA--NVRPLQPKMDEL 135
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -2
Query: 594 DVTLV*MVDWCLRSKKEHNDEDYNHGQAYVLDHAIAHKG 478
D+ V M+ W LR+ + + + Q VLDHA +H G
Sbjct: 120 DIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLG 158
>SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058)
Length = 1002
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/84 (26%), Positives = 37/84 (44%)
Frame = -3
Query: 413 PRLSSVAISAQYIGVIVNSIPTARPQNTRPAYIIPILRAAATNINPMDMGSDELMRPHLR 234
P + + +S + IV S P RP P + PI+ + N P+ + P++R
Sbjct: 500 PNVGPIVVSPLNVRPIVVSPPNVRPIVVSPLNVRPIM-VSPPNARPIMVSP-----PNVR 553
Query: 233 PIVEAANPPTKGPNIAPTVTKEPI 162
PI+ +PP P + + PI
Sbjct: 554 PIM--VSPPNVRPIVVSPLNVRPI 575
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = -3
Query: 413 PRLSSVAISAQYIGVIVNSIPTARPQNTRPAYIIPILRAAATNINPMDMGSDELMRPHLR 234
P + + +S + I+ S P ARP P + PI+ + N+ P+ + S +RP +
Sbjct: 520 PNVRPIVVSPLNVRPIMVSPPNARPIMVSPPNVRPIM-VSPPNVRPI-VVSPLNVRPIVV 577
Query: 233 PIVEAANPPTKGPNIAPTVTKEP 165
+ PN+ P V P
Sbjct: 578 SPLNVRPIMVSPPNVRPIVVSPP 600
Score = 28.7 bits (61), Expect = 3.9
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 3/133 (2%)
Frame = -3
Query: 413 PRLSSVAISAQYIGVIVNSIPTARPQNTRPAYIIPILRAAATNINPMDMGSDELMRPHLR 234
P + + +S +G IV S RP P + PI+ ++P+++ + P++R
Sbjct: 470 PNVRPIMVSPPNVGPIVVSPLNVRPIMVSPPNVGPIV------VSPLNVRPIVVSPPNVR 523
Query: 233 PIVEAANPPTKGPNIAPTVTKEPIHESSSFVTGLSKGDSSV--IFNLPLTGEVQPI-M*P 63
PIV +P P + PI S V + +V I PL V+PI + P
Sbjct: 524 PIV--VSPLNVRPIMVSPPNARPIMVSPPNVRPIMVSPPNVRPIVVSPL--NVRPIVVSP 579
Query: 62 VHAIAMFATPPKI 24
++ + +PP +
Sbjct: 580 LNVRPIMVSPPNV 592
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = -3
Query: 422 PRAPRLSSVAISAQYIGVIVNSIPTARPQNTRPAYIIPIL----RAAATNINPMDMGSDE 255
P+ + + +S + IV S P RP P + PI+ A ++P+++
Sbjct: 297 PQDNNVRPIMVSPLNVRPIVVSPPNVRPIVVSPLNVRPIMVSPPNARPILVSPLNVRPIV 356
Query: 254 LMRPHLRPIVEAANPPTKGPNIAPTVTKEPI 162
+ P++RPIV +P P + + PI
Sbjct: 357 VSPPNVRPIV--VSPLNARPIVVSPLNVRPI 385
>SB_35860| Best HMM Match : Sugar_tr (HMM E-Value=1e-04)
Length = 544
Score = 29.5 bits (63), Expect = 2.2
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 2/113 (1%)
Frame = +1
Query: 154 LSWI-GSLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYA-G 327
LSW S++ G +FG V G + GR+ L SS M ++ +YA
Sbjct: 92 LSWATNSIMFTGWLFGNIVFGILSDKYGRRKVLFISSC-MVCWVAFASSFVPYYWLYAVF 150
Query: 328 RVFWGLAVGMLFTITPMYCAEIATDDSRGALGSFLQVFVVIGFLLVYSVGPFV 486
R F G +G I + E R G+F F +L+ + F+
Sbjct: 151 RFFIGFGLGGSIVILFIMATEFVGPQKRAMAGTFTWYFWTGALMLIALLAYFI 203
>SB_19373| Best HMM Match : MFS_1 (HMM E-Value=3.36312e-44)
Length = 472
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 163 IGSLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYA-GRVFW 339
+GSL + G GR+ + L ++G L + A +I M+Y + +
Sbjct: 66 VGSLAIAMTFTATLLAGRLIDRYGRRIVSFAGGLTCALGLTLTSFAHSINMLYCYYSLTF 125
Query: 340 GLAVGMLFT 366
GL +LFT
Sbjct: 126 GLGCSLLFT 134
>SB_17113| Best HMM Match : Sugar_tr (HMM E-Value=0.015)
Length = 292
Score = 29.5 bits (63), Expect = 2.2
Identities = 31/141 (21%), Positives = 50/141 (35%), Gaps = 1/141 (0%)
Frame = +1
Query: 184 GAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFWGLAVGMLF 363
G + G + GR+ + S M+ I+ + + M R G A
Sbjct: 9 GLLVGSVTFSSISDHFGRRLSMFLSIFLMAACGIVSGVSDCLSMFALFRFGAGAACAGCL 68
Query: 364 TITPMYCAEIATDDSRGALGSFLQVFVVIGFLLVYSVGPFVSYSVVQYVGL-AXXXXXXX 540
+YC E+ R A G +FV +GF V F+ Q V + A
Sbjct: 69 LARYVYCVELVVRKHRTAAGFISNMFVSVGFSSVTLFVYFIHEWRYQLVAVSATGLPLLI 128
Query: 541 XXXXAPETPIYHLYKGDVDSA 603
PE+P + + + +D A
Sbjct: 129 FWWFIPESPRWLIAENKLDEA 149
>SB_23581| Best HMM Match : HEAT (HMM E-Value=6.1e-11)
Length = 554
Score = 24.2 bits (50), Expect(2) = 2.7
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 347 ARPQNTRPAYIIPILRAAATNI 282
+R N PAYI+P LR A I
Sbjct: 351 SRLSNLNPAYIMPSLRKALIQI 372
Score = 23.4 bits (48), Expect(2) = 2.7
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -3
Query: 254 LMRPHLRPIVEAANPPTKGPN 192
L+RP++ PI++A P + P+
Sbjct: 402 LIRPYMEPILKALIPKLRDPD 422
>SB_28947| Best HMM Match : Sugar_tr (HMM E-Value=2.1e-06)
Length = 624
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/101 (21%), Positives = 39/101 (38%)
Frame = +1
Query: 184 GAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFWGLAVGMLF 363
G G +GG + GR+ + S + I + + A + ++ R G ++
Sbjct: 66 GMAVGSLLGGLISDAFGRRLCMFLSCGILVISGVAASFADCLSLLGLLRFCIGFSLASFM 125
Query: 364 TITPMYCAEIATDDSRGALGSFLQVFVVIGFLLVYSVGPFV 486
+ +Y E+ R G VF G+ L +G FV
Sbjct: 126 LSSYIYMIELIGPQYRTMGGQISHVFYSPGYCLTALIGYFV 166
>SB_22037| Best HMM Match : Xan_ur_permease (HMM E-Value=2e-07)
Length = 445
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = +1
Query: 136 PVTNDELSWIGSLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGM 315
PV D+ S++G + +GA+F G +G++++ ++ F+ + ++RN+ +
Sbjct: 241 PVRRDDSSFMGVIGKIGALFTTVPGPIVGGVFMVMFGIVAAVGISTLQFVDLNSSRNLFI 300
Query: 316 I 318
I
Sbjct: 301 I 301
>SB_11981| Best HMM Match : CH (HMM E-Value=0.00075)
Length = 823
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 93 DRGSPTHHVTGTCYRDVCNTTEDKLA 16
D SP H TG Y+D C++ + KLA
Sbjct: 615 DIESPRTHFTGVSYKDKCDSAKAKLA 640
>SB_52308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 470 LYTNKNPITTNT*RNDPRAPRLSSVAISAQYIGVIVNSIPTARPQNT 330
LY NPI N PR + S+A+ QY V+V P A+P +
Sbjct: 143 LYLLCNPI-----ENIPRDVYIQSLAVIRQYFNVVVKEEPEAQPSQS 184
>SB_957| Best HMM Match : Lactamase_B (HMM E-Value=0.38)
Length = 236
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 340 GLAVGMLFTITPMYCAEIATDDSRGALGSF 429
G V +FT T +C ATDD++ GS+
Sbjct: 163 GNDVAFIFTPTQHWCKRAATDDNKALWGSW 192
>SB_14179| Best HMM Match : E-MAP-115 (HMM E-Value=2.8)
Length = 313
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 187 AIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIYAGRVFW 339
AIF + GF A+ IG +++ S+G L + AR +G +G + W
Sbjct: 179 AIFKKY--GFTATAIGLAVATTIAAIVTSLGKSLSSVARGVGRRRSGEIPW 227
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,643,119
Number of Sequences: 59808
Number of extensions: 439299
Number of successful extensions: 1384
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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