Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_O22
(578 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q016J3 Cluster: Putative formylglycineamide ribotide am... 62 1e-08
UniRef50_Q9M8D3 Cluster: Probable phosphoribosylformylglycinamid... 56 5e-07
UniRef50_P35421 Cluster: Phosphoribosylformylglycinamidine synth... 56 6e-07
UniRef50_Q6AQE0 Cluster: Probable phosphoribosylformylglycinamid... 54 3e-06
UniRef50_Q7MXB0 Cluster: Phosphoribosylformylglycinamidine synth... 53 6e-06
UniRef50_Q19311 Cluster: Probable phosphoribosylformylglycinamid... 53 6e-06
UniRef50_Q54JC8 Cluster: Phosphoribosylformylglycinamide synthas... 51 2e-05
UniRef50_O15067 Cluster: Phosphoribosylformylglycinamidine synth... 46 9e-04
UniRef50_P03179 Cluster: Probable membrane antigen P140; n=7; Ly... 42 0.008
UniRef50_Q8BEM8 Cluster: ORF65; n=1; Callitrichine herpesvirus 3... 42 0.014
UniRef50_Q2GZN5 Cluster: Putative uncharacterized protein; n=1; ... 41 0.024
UniRef50_Q60B11 Cluster: Phosphoribosylformylglycinamidine synth... 40 0.032
UniRef50_Q99D25 Cluster: V-FGAM-synthase; n=1; Bovine herpesviru... 39 0.074
UniRef50_Q01000 Cluster: Probable membrane antigen 3; n=4; Herpe... 38 0.17
UniRef50_P38972 Cluster: Phosphoribosylformylglycinamidine synth... 38 0.23
UniRef50_A6EP05 Cluster: Phosphoribosylformylglycinamidine synth... 37 0.39
UniRef50_Q12AE0 Cluster: Phosphoribosylformylglycinamidine synth... 36 0.91
UniRef50_Q8XYN6 Cluster: Phosphoribosylformylglycinamidine synth... 35 1.2
UniRef50_Q5QWY0 Cluster: Phosphoribosylformylglycinamidine synth... 35 1.6
UniRef50_A5WCV9 Cluster: Phosphoribosylformylglycinamidine synth... 34 2.1
UniRef50_Q95JV0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.1
UniRef50_P11282 Cluster: Probable membrane antigen 75; n=3; Herp... 34 2.8
UniRef50_A0B5C6 Cluster: Phosphoribosylformylglycinamidine synth... 33 3.7
UniRef50_Q9PDF6 Cluster: Phosphoribosylformylglycinamidine synth... 33 4.9
UniRef50_Q6LU24 Cluster: Phosphoribosylformylglycinamidine synth... 33 4.9
UniRef50_Q9LZD0 Cluster: Uracil transporter-like protein; n=6; M... 33 6.4
UniRef50_UPI0000E802D4 Cluster: PREDICTED: hypothetical protein;... 32 8.5
UniRef50_A4VCV9 Cluster: Putative uncharacterized protein; n=1; ... 32 8.5
>UniRef50_Q016J3 Cluster: Putative formylglycineamide ribotide am;
n=2; cellular organisms|Rep: Putative formylglycineamide
ribotide am - Ostreococcus tauri
Length = 1078
Score = 61.7 bits (143), Expect = 1e-08
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLWASNH 164
DGRH+AMMPHPER + WQ P AP DP PWL++FQNA WAS+H
Sbjct: 1027 DGRHLAMMPHPERAFIGWQVPW-APSD-AGIDPYGP-GPWLQMFQNAQRWASSH 1077
>UniRef50_Q9M8D3 Cluster: Probable phosphoribosylformylglycinamidine
synthase, chloroplast precursor; n=40; Eukaryota|Rep:
Probable phosphoribosylformylglycinamidine synthase,
chloroplast precursor - Arabidopsis thaliana (Mouse-ear
cress)
Length = 1387
Score = 56.4 bits (130), Expect = 5e-07
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
DGRH+AMMPHPERC + WQ P P SPWL++FQNA W
Sbjct: 1337 DGRHLAMMPHPERCFLMWQFPW---YPTSWDVEKAGPSPWLKMFQNARDW 1383
>UniRef50_P35421 Cluster: Phosphoribosylformylglycinamidine synthase;
n=7; Fungi/Metazoa group|Rep:
Phosphoribosylformylglycinamidine synthase - Drosophila
melanogaster (Fruit fly)
Length = 1354
Score = 56.0 bits (129), Expect = 6e-07
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
DGRH+A+MPHPERC+ +Q P P S PT SPW +F NAY W
Sbjct: 1301 DGRHLALMPHPERCSSMYQWPY-VPSSFEVS-PTQSESPWQIMFNNAYNW 1348
>UniRef50_Q6AQE0 Cluster: Probable phosphoribosylformylglycinamidine
synthase; n=1; Desulfotalea psychrophila|Rep: Probable
phosphoribosylformylglycinamidine synthase - Desulfotalea
psychrophila
Length = 1267
Score = 53.6 bits (123), Expect = 3e-06
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLWASNH 164
DGRH+A+MPHPERC + WQ L + SPW ++F+NAY W ++
Sbjct: 1219 DGRHLALMPHPERCFLPWQM-----HYLPEEMKELEVSPWFQMFKNAYDWCMSN 1267
>UniRef50_Q7MXB0 Cluster: Phosphoribosylformylglycinamidine synthase,
putative; n=26; Bacteroidetes/Chlorobi group|Rep:
Phosphoribosylformylglycinamidine synthase, putative -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 1234
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/57 (43%), Positives = 32/57 (56%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLWASNH*NN 173
DGRH+ MMPHPER WQC P+ S Q +PW++ F+NAY W + N
Sbjct: 1181 DGRHLTMMPHPERSIFPWQCGY-YPE---SQRHEHQVTPWMQAFRNAYEWIAKQVKN 1233
>UniRef50_Q19311 Cluster: Probable phosphoribosylformylglycinamidine
synthase; n=2; Caenorhabditis|Rep: Probable
phosphoribosylformylglycinamidine synthase -
Caenorhabditis elegans
Length = 1343
Score = 52.8 bits (121), Expect = 6e-06
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVS--SDPTCQYSPWLRLFQNAYLW 152
DGRH+AMMPH +R + WQ + P + T SPW+++F+NAY W
Sbjct: 1290 DGRHLAMMPHADRSFLTWQWAESSEVPWNARFDQKTVALSPWIKMFRNAYNW 1341
>UniRef50_Q54JC8 Cluster: Phosphoribosylformylglycinamide synthase;
n=1; Dictyostelium discoideum AX4|Rep:
Phosphoribosylformylglycinamide synthase - Dictyostelium
discoideum AX4
Length = 1355
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNA 143
DGRH+A+MPHPER + WQ P + Q SPW+++FQNA
Sbjct: 1301 DGRHLAIMPHPERSFLSWQWPFMPENIKQNVGGLDQPSPWIKIFQNA 1347
>UniRef50_O15067 Cluster: Phosphoribosylformylglycinamidine synthase;
n=26; Eukaryota|Rep: Phosphoribosylformylglycinamidine
synthase - Homo sapiens (Human)
Length = 1338
Score = 45.6 bits (103), Expect = 9e-04
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
DGRH+A+MPHPER WQ P P T SPWL+L NA W
Sbjct: 1288 DGRHLAVMPHPERAVRPWQWAW-RPPPF----DTLTTSPWLQLSINARNW 1332
>UniRef50_P03179 Cluster: Probable membrane antigen P140; n=7;
Lymphocryptovirus|Rep: Probable membrane antigen P140 -
Epstein-Barr virus (strain B95-8) (HHV-4) (Human
herpesvirus 4)
Length = 1318
Score = 42.3 bits (95), Expect = 0.008
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLWASNH 164
DGRH+A++ P CT WQ P PT SPW +FQ A+LW+ H
Sbjct: 1264 DGRHLALLCDPSLCTDFWQWEHIPP---AFGHPT-GCSPWTLMFQAAHLWSLRH 1313
>UniRef50_Q8BEM8 Cluster: ORF65; n=1; Callitrichine herpesvirus 3|Rep:
ORF65 - Callitrichine herpesvirus 3 (Marmoset
lymphocryptovirus)
Length = 1321
Score = 41.5 bits (93), Expect = 0.014
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLWA 155
DGRH+AM+ +P CT W P P + SPWL FQ A++WA
Sbjct: 1269 DGRHLAMLFNPSLCTQLWHWP-HIP---FQTRSHLLGSPWLLAFQEAHIWA 1315
>UniRef50_Q2GZN5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 1221
Score = 40.7 bits (91), Expect = 0.024
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPK--PLVSSDPTCQYSPWLRLFQNAYLW 152
DGR +AMMPHPER P D P + ++ PWLR+F++A W
Sbjct: 1173 DGRVLAMMPHPER-----NIPADVASYVPADEIEEWGEFGPWLRMFRSARRW 1219
>UniRef50_Q60B11 Cluster: Phosphoribosylformylglycinamidine synthase;
n=10; Proteobacteria|Rep:
Phosphoribosylformylglycinamidine synthase -
Methylococcus capsulatus
Length = 1288
Score = 40.3 bits (90), Expect = 0.032
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
DGR MMPHPERC ++ ++ +P +Y PW+R+F+NA W
Sbjct: 1244 DGRFTIMMPHPERC---FRTVQNSWRP----RDWGEYGPWMRMFRNARRW 1286
>UniRef50_Q99D25 Cluster: V-FGAM-synthase; n=1; Bovine herpesvirus
4|Rep: V-FGAM-synthase - Bovine herpesvirus 4 (BoHV-4)
(Movar virus)
Length = 1288
Score = 39.1 bits (87), Expect = 0.074
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLWAS 158
DGRH+A++ P WQ P PK P + SPW R+F + ++WA+
Sbjct: 1220 DGRHLALLHDPGLSNNLWQWP-HIPK----MTPPLKVSPWKRMFLDLHIWAN 1266
>UniRef50_Q01000 Cluster: Probable membrane antigen 3; n=4;
Herpesviridae|Rep: Probable membrane antigen 3 -
Saimiriine herpesvirus 2 (strain 11) (SaHV-2)
(Herpesvirus saimiri)
Length = 1246
Score = 37.9 bits (84), Expect = 0.17
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
DGRH+A++ P C WQ P PL +P + SPW +F + + W
Sbjct: 1179 DGRHLALLHDPSLCNNLWQWPY---VPL--ENPPLKVSPWKTMFLDLHKW 1223
>UniRef50_P38972 Cluster: Phosphoribosylformylglycinamidine synthase;
n=19; cellular organisms|Rep:
Phosphoribosylformylglycinamidine synthase -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1358
Score = 37.5 bits (83), Expect = 0.23
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
+GR +AMMPHPER + ++ P + Y PW+RLF++A W
Sbjct: 1310 NGRVLAMMPHPERVC---RLEANSWYPEGKYEEWGGYGPWIRLFRSARRW 1356
>UniRef50_A6EP05 Cluster: Phosphoribosylformylglycinamidine synthase;
n=2; Bacteroidetes|Rep: Phosphoribosylformylglycinamidine
synthase - unidentified eubacterium SCB49
Length = 1256
Score = 36.7 bits (81), Expect = 0.39
Identities = 21/49 (42%), Positives = 24/49 (48%)
Frame = +3
Query: 6 GRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
GRH+ MMPH ER T W P S+D +PWL F NA W
Sbjct: 1210 GRHLVMMPHLERSTFPWNW---GHYPSDSNDVV---TPWLEGFVNARKW 1252
>UniRef50_Q12AE0 Cluster: Phosphoribosylformylglycinamidine synthase;
n=3; Comamonadaceae|Rep:
Phosphoribosylformylglycinamidine synthase - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 1375
Score = 35.5 bits (78), Expect = 0.91
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
DGR AMMPHPER Q + ++SPW++L+ NA W
Sbjct: 1331 DGRFTAMMPHPERVFRNVQMSW-------TMGDKGEFSPWMQLWHNARRW 1373
>UniRef50_Q8XYN6 Cluster: Phosphoribosylformylglycinamidine synthase;
n=49; cellular organisms|Rep:
Phosphoribosylformylglycinamidine synthase - Ralstonia
solanacearum (Pseudomonas solanacearum)
Length = 1369
Score = 35.1 bits (77), Expect = 1.2
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNA 143
DGR +MPHPER Q + D + SPW+R+F+NA
Sbjct: 1321 DGRFTVLMPHPERVFRAVQMSWHPKDWAAAGDGS---SPWMRMFRNA 1364
>UniRef50_Q5QWY0 Cluster: Phosphoribosylformylglycinamidine synthase;
n=60; Proteobacteria|Rep:
Phosphoribosylformylglycinamidine synthase - Idiomarina
loihiensis
Length = 1295
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNA 143
DGR AMMPHPER ++ ++ P D + SPW+R+F+NA
Sbjct: 1251 DGRVTAMMPHPERV---FRTVANSWHP----DEWGEDSPWMRMFRNA 1290
>UniRef50_A5WCV9 Cluster: Phosphoribosylformylglycinamidine synthase;
n=3; Psychrobacter|Rep: Phosphoribosylformylglycinamidine
synthase - Psychrobacter sp. PRwf-1
Length = 1341
Score = 34.3 bits (75), Expect = 2.1
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
DGR MMPHPER T+R + KP D W+R+F+NA W
Sbjct: 1297 DGRVTLMMPHPER-TLR--AVNHSWKP----DEWADDGAWMRMFRNARAW 1339
>UniRef50_Q95JV0 Cluster: Putative uncharacterized protein; n=1;
Macaca fascicularis|Rep: Putative uncharacterized
protein - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 113
Score = 34.3 bits (75), Expect = 2.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 15 IAMMPHPERCTMRWQCPTDAPKPLVSSDPTC 107
IA++ H ++CT W C T K L+S P C
Sbjct: 55 IALLLHAKKCTKIWDCVTQRRKRLISRRPPC 85
>UniRef50_P11282 Cluster: Probable membrane antigen 75; n=3;
Herpesviridae|Rep: Probable membrane antigen 75 -
Saimiriine herpesvirus 2 (strain 11) (SaHV-2)
(Herpesvirus saimiri)
Length = 1299
Score = 33.9 bits (74), Expect = 2.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
+GRH+A++ P WQ PKPLV+S PW ++Q +LW
Sbjct: 1254 NGRHLALLVEPALSFHTWQWQ-HIPKPLVTS-------PWALMYQCMFLW 1295
>UniRef50_A0B5C6 Cluster: Phosphoribosylformylglycinamidine synthase
I; n=1; Methanosaeta thermophila PT|Rep:
Phosphoribosylformylglycinamidine synthase I -
Methanosaeta thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 262
Score = 33.5 bits (73), Expect = 3.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPK 80
+G + MMPHPER WQ P P+
Sbjct: 214 EGNVLGMMPHPERAFFAWQLPRKHPR 239
>UniRef50_Q9PDF6 Cluster: Phosphoribosylformylglycinamidine synthase;
n=6; Gammaproteobacteria|Rep:
Phosphoribosylformylglycinamidine synthase - Xylella
fastidiosa
Length = 1322
Score = 33.1 bits (72), Expect = 4.9
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
DGR +MPHPER T R + +P +PWLRLF+NA W
Sbjct: 1278 DGRITILMPHPER-TPRTINLSWSPNEWGED------TPWLRLFRNARAW 1320
>UniRef50_Q6LU24 Cluster: Phosphoribosylformylglycinamidine synthase;
n=103; Proteobacteria|Rep:
Phosphoribosylformylglycinamidine synthase -
Photobacterium profundum (Photobacterium sp. (strain
SS9))
Length = 1322
Score = 33.1 bits (72), Expect = 4.9
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 3 DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNA 143
DGR MMPHPER ++ ++ P D + SPW+R+F+NA
Sbjct: 1278 DGRVTIMMPHPERV---FRTVANSWHP----DDWNENSPWMRMFRNA 1317
>UniRef50_Q9LZD0 Cluster: Uracil transporter-like protein; n=6;
Magnoliophyta|Rep: Uracil transporter-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 599
Score = 32.7 bits (71), Expect = 6.4
Identities = 21/74 (28%), Positives = 40/74 (54%)
Frame = +3
Query: 327 LMLHINKIGYKYS*RSLKPKLKSDYQ*GIYEHFNFILEESAVY*SMTSCIKRFVLRERDR 506
L LH+N +K++ SL L+S + +Y+H +F +S+ S TSC+ F ++ +
Sbjct: 8 LSLHLNLHPHKHNRHSLS-SLRSRTKAKLYQHVSFT--DSSHKSSYTSCVSTFDIQRKSS 64
Query: 507 TSLDSHQHL*TPII 548
+ +H +PI+
Sbjct: 65 KHYELGKHSFSPIL 78
>UniRef50_UPI0000E802D4 Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 527
Score = 32.3 bits (70), Expect = 8.5
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 28 HIPSVALCVGNAPRMHRN-PSFPPTPLANIPLG 123
H P C APR H + PSFPP PL P G
Sbjct: 18 HSPGAIPCPEAAPRPHPSAPSFPPLPLLRGPAG 50
>UniRef50_A4VCV9 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 202
Score = 32.3 bits (70), Expect = 8.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 243 QYIYQFVSPLRMVFVIYLLCLQIFIEYFLMLHINK 347
Q+IY F+ L+ + +IY Q I Y L+L I K
Sbjct: 118 QFIYLFIRSLKRIIIIYFFIWQFIIFYTLLLIIEK 152
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,427,664
Number of Sequences: 1657284
Number of extensions: 11679849
Number of successful extensions: 31688
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 30549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31644
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -