Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O22
         (578 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_52131| Best HMM Match : AIRS_C (HMM E-Value=1.69978e-42)            63   1e-10
SB_14842| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.6  
SB_51528| Best HMM Match : 7tm_1 (HMM E-Value=1.4)                     28   4.8  
SB_47862| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_40335| Best HMM Match : EGF (HMM E-Value=2.5e-09)                   28   6.3  
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)                     28   6.3  
SB_12042| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.4  
SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9)                  27   8.4  
SB_21565| Best HMM Match : Atracotoxin (HMM E-Value=5.8)               27   8.4  

>SB_52131| Best HMM Match : AIRS_C (HMM E-Value=1.69978e-42)
          Length = 1371

 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 30/50 (60%), Positives = 34/50 (68%)
 Frame = +3

Query: 3    DGRHIAMMPHPERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAYLW 152
            DGRH+AMMPHPERCT+ WQ     P+    S  T   SPWLR+FQNAY W
Sbjct: 1321 DGRHLAMMPHPERCTLPWQWAW-MPEEWRGSMST---SPWLRMFQNAYEW 1366


>SB_14842| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 121

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = +2

Query: 20  HDATSRALHYALAMPHGCTETPRFLRPHLPIFPLASTLPKRISLGFEPLK*SPI 181
           +D       Y LA+     E PR        F +  T P R S  F P+  SP+
Sbjct: 37  NDIAQSVQRYQLAVQEAKNEQPRIFAKEFHRFAMLPTSPGRSSPSFFPMSLSPL 90


>SB_51528| Best HMM Match : 7tm_1 (HMM E-Value=1.4)
          Length = 205

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 417 HKCLIDNQILILVSVIFSYIYSLFYLYEALK 325
           HK + D Q+ + V + F   YS F+LY  +K
Sbjct: 50  HKYIEDVQMFVKVIIAFCIPYSAFFLYNLVK 80


>SB_47862| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 454

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = +3

Query: 249 IYQFVSPLRMVFVIYLLCLQIFIEYFLMLHINKIGYKYS*RSLKPKLKSDYQ*GIYEHFN 428
           IY+F      + VI LLC  + + +F++ ++N+  +K+       ++ S    GIY  +N
Sbjct: 354 IYRF----EFLMVITLLCAALTVIFFVISNVNEAQWKFGSEESTVEISSALFTGIYGMWN 409

Query: 429 -FILEESAVY*SMTSCIKRFVLRERDRTSL 515
            ++L    +Y   T          RD   L
Sbjct: 410 TYVLTLMYLYAPSTGDFAAGYNESRDTVEL 439


>SB_40335| Best HMM Match : EGF (HMM E-Value=2.5e-09)
          Length = 309

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 33  PERCTMRWQCPTDAPKPLVSSDPTCQ 110
           P RC  +  C TDAP  L    PT Q
Sbjct: 235 PNRCIAKNYCDTDAPGWLAGGHPTIQ 260


>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
          Length = 4303

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = +1

Query: 70   MHRNPSFPPTPLANIPLGFDSSKTHISGLRTIKII--PY 180
            +HRNP+    PL  IP+   +   H + L+ +++I  PY
Sbjct: 1077 IHRNPAQGQVPLHQIPISIHAQLHHYAVLQQVQMIHNPY 1115


>SB_12042| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 142

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = -1

Query: 263 NELINVLISN*YSILSLDLMKRNNMSLL*GIILMVRSPEICVLEESKPRGIL 108
           NEL + L S+ Y + S      +N++ +   I   R PE+C+L+ +KP G+L
Sbjct: 68  NELNSALASSLYDVES------DNVTQVVNFIQTPRKPELCMLKTAKP-GVL 112


>SB_8366| Best HMM Match : Ponericin (HMM E-Value=2.9)
          Length = 307

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 14  YRHDATSRALHYALAMPHGC-TETPRFLRPHLPI 112
           +RHD  +R +H+A+A  HG   +  R+    LP+
Sbjct: 211 HRHDNVARIVHWAIAKEHGFEVKEKRYEHELLPV 244


>SB_21565| Best HMM Match : Atracotoxin (HMM E-Value=5.8)
          Length = 304

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 33  PERCTMRWQCPTDAPKPLVSSDPTCQYSPWLRLFQNAY 146
           P  C    +C T AP  +V S P+ +YS   R   N Y
Sbjct: 210 PTSCVPVKRCGTHAPGWIVGSHPSLRYSLVTRKVSNKY 247


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,470,308
Number of Sequences: 59808
Number of extensions: 357166
Number of successful extensions: 983
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)