Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O22
         (578 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr...    53   2e-07
U97005-11|AAB52288.1|  891|Caenorhabditis elegans Hypothetical p...    31   0.45 
Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z75530-8|CAA99792.2|  405|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z69792-4|CAA93665.1|  212|Caenorhabditis elegans Hypothetical pr...    27   7.3  
U55366-3|AAY86188.1|  118|Caenorhabditis elegans Hypothetical pr...    27   7.3  

>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical protein
            F10F2.2 protein.
          Length = 1343

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
 Frame = +3

Query: 3    DGRHIAMMPHPERCTMRWQCPTDAPKPLVS--SDPTCQYSPWLRLFQNAYLW 152
            DGRH+AMMPH +R  + WQ    +  P  +     T   SPW+++F+NAY W
Sbjct: 1290 DGRHLAMMPHADRSFLTWQWAESSEVPWNARFDQKTVALSPWIKMFRNAYNW 1341


>U97005-11|AAB52288.1|  891|Caenorhabditis elegans Hypothetical
           protein F19F10.10 protein.
          Length = 891

 Score = 31.5 bits (68), Expect = 0.45
 Identities = 15/26 (57%), Positives = 18/26 (69%)
 Frame = -1

Query: 188 SLL*GIILMVRSPEICVLEESKPRGI 111
           SL+ GI L ++ P  CVLEE KPR I
Sbjct: 607 SLVSGIPLGIQEPSECVLEEEKPRDI 632


>Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical
           protein K07C5.6 protein.
          Length = 647

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 554 LRYNRRLKVLVGVERCSIPFPQNETLNA*RHTSVYCAFF 438
           + YNR+ KV+ G E+ +I     E +    HTSV+ +F+
Sbjct: 374 IEYNRKGKVIKGKEKVAISSRFKEDIYPQNHTSVFGSFW 412


>Z75530-8|CAA99792.2|  405|Caenorhabditis elegans Hypothetical
           protein C47E8.3 protein.
          Length = 405

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +3

Query: 228 ILIGDQYIYQFVSPLRMVFVIYLLCLQIFIEYF 326
           I++G  YI   V P+ M + +YL    IF+ YF
Sbjct: 73  IIMGINYIAVMVVPVYMDYYLYLPLWHIFLSYF 105


>Z69792-4|CAA93665.1|  212|Caenorhabditis elegans Hypothetical
           protein F40E10.2 protein.
          Length = 212

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 64  PRMH-RNPSFPPTPLANIPLGFDSSKTH 144
           PR++   P+ PP  L N    FDS KTH
Sbjct: 132 PRLNIAMPTIPPQSLFNYSTAFDSLKTH 159


>U55366-3|AAY86188.1|  118|Caenorhabditis elegans Hypothetical
           protein F41F3.8 protein.
          Length = 118

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 25  CHIPSVALCVGNAPRMH-RNPSFPPTPLANIPL 120
           C  PS++LC G APR     P F P P  + PL
Sbjct: 26  CGGPSLSLCGGCAPRPRVAAPPFAPPPPPSPPL 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,242,117
Number of Sequences: 27780
Number of extensions: 279771
Number of successful extensions: 768
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)