Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_O21
(250 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0308 - 33033073-33033130,33033224-33033568,33033655-33033839 29 0.52
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019 27 2.1
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 27 2.1
02_05_0367 - 28331479-28332358,28332432-28332988,28333454-283336... 27 2.1
06_03_0844 + 25320389-25320519,25321171-25321366 27 2.8
01_06_1284 + 35994595-35995074 27 2.8
01_06_1061 - 34169469-34169624,34170837-34170938,34171029-341711... 27 2.8
11_08_0067 - 28135216-28135728 26 3.7
06_03_1210 + 28442253-28442967,28443338-28443405 26 3.7
03_01_0018 - 157657-158487 26 4.8
11_01_0146 + 1224143-1224409,1224760-1224888,1225759-1225815,122... 25 6.4
03_05_0650 - 26423829-26424179,26424379-26424612,26424961-264252... 25 6.4
12_02_1083 - 25922670-25922867,25922962-25923213,25923674-259238... 25 8.5
11_03_0212 - 11761856-11762037,11762302-11762398,11763571-117645... 25 8.5
11_01_0145 + 1204021-1204296,1204430-1204492,1204667-1204795,120... 25 8.5
07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323 25 8.5
07_01_0467 - 3524598-3524837,3524939-3525466,3526242-3526892,352... 25 8.5
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 25 8.5
04_01_0333 - 4391571-4392289,4393048-4393159 25 8.5
01_05_0737 - 24780952-24781100,24781515-24783453 25 8.5
>03_06_0308 - 33033073-33033130,33033224-33033568,33033655-33033839
Length = 195
Score = 29.1 bits (62), Expect = 0.52
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 117 SSRSVMVCCKARGKSPQRAGPMPVFRVYXYAQPPIGEYR 233
S S CC G G P +V PP+G YR
Sbjct: 37 SEASGTACCGGAGARDVEDGASPASKVQVVGWPPVGSYR 75
>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
Length = 508
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 149 AWKVSTKGRTYASFQGVPXRATSHWRIQI*RTAR 250
A K+ R F +P T HWR+++ TAR
Sbjct: 190 ASKIDYAWRIILMFGAIPAALTYHWRMKMPETAR 223
>03_01_0219 +
1731267-1731728,1732148-1732235,1732330-1732417,
1732528-1732573,1732687-1732785,1734363-1734431,
1735706-1736036,1736123-1736256,1736400-1737251
Length = 722
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 68 IFITGLGLASTEGPKPVVKVSHGVLQGAWKVSTK--GRTYASFQGVPXRAT 214
IF+ G+G E P V V V + KVS+K G+ A+ G P T
Sbjct: 146 IFLRGVGFVDDEAPAAAVVVKVEVEEKKKKVSSKATGKGDAASDGGPTTGT 196
>02_05_0367 -
28331479-28332358,28332432-28332988,28333454-28333671,
28333748-28333831,28334199-28334373,28334572-28334574
Length = 638
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 16 PPSKISSFEY*NVLKTIYIYYRA 84
PPS +S+F+ V TI++Y RA
Sbjct: 427 PPSSMSAFDILTVATTIFLYRRA 449
>06_03_0844 + 25320389-25320519,25321171-25321366
Length = 108
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 85 RFSFDRRSETCRQGQSWCAARRVESLHKGQDLCQFSGCTXTRNLPLE 225
R+S R++ R+ + WCA + S + + T T +L LE
Sbjct: 44 RWSLGSRNKDGREWRGWCAVSSLSSGASIDGVIELEDATTTMDLELE 90
>01_06_1284 + 35994595-35995074
Length = 159
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 83 LGLASTEGPKPVVKVSHGVLQGAWKVSTKGRTYASFQGVPXRATSHWRIQ 232
L L+S S +G ++ T + + SFQ + TSH R+Q
Sbjct: 12 LSLSSPAASASQPTSSSSTTEGVFECKTCSKRFPSFQALGGHRTSHTRLQ 61
>01_06_1061 -
34169469-34169624,34170837-34170938,34171029-34171180,
34172087-34172153,34172239-34172419,34172655-34172778,
34174775-34174871,34175929-34176331,34176729-34176888,
34177412-34177486,34177714-34177892,34178224-34178303,
34178561-34179322
Length = 845
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +2
Query: 26 RFHLSNIKMFLKLFIFITGLGLASTEGPKPVVKVSHGVLQG 148
+F + +++ K FI++ GL L + G + ++ G+L G
Sbjct: 740 KFRIFGLRLSDKSFIYLAGLQLLFSSGWRSIIPGLSGILAG 780
>11_08_0067 - 28135216-28135728
Length = 170
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 146 GAWKVSTKGRTYASFQGVPXRATSHWRIQI 235
GA++ T GR +++FQ + TSH R ++
Sbjct: 43 GAFQCRTCGRRFSTFQALGGHRTSHKRPRV 72
>06_03_1210 + 28442253-28442967,28443338-28443405
Length = 260
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 138 CCKARGKSPQRAGPMPVFRVYXYAQPPIGEYRFREP 245
CC + SPQ+ P R++ A P Y + +P
Sbjct: 195 CCTGQFGSPQQCKPTAYSRLFKTACPKAYSYAYDDP 230
>03_01_0018 - 157657-158487
Length = 276
Score = 25.8 bits (54), Expect = 4.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 250 SCGSLNLYSPMGGCAXWYTLKTGIGPALCGD 158
SCG+ LY GC Y ++ PA G+
Sbjct: 86 SCGNQPLYKGGKGCGSCYRVRCNRNPACSGN 116
>11_01_0146 +
1224143-1224409,1224760-1224888,1225759-1225815,
1225903-1226201,1226474-1226565,1226946-1227160,
1227205-1227228,1227314-1227497,1227612-1227742
Length = 465
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 IFITGLGLASTEGPKPVVKVSHG--VLQGAWKVST 166
+ + G GL +T+ V KV HG ++ AW + T
Sbjct: 417 LLVDGFGLEATKEMTLVEKVKHGEYYIEAAWPLGT 451
>03_05_0650 -
26423829-26424179,26424379-26424612,26424961-26425236,
26425372-26425648,26425751-26425764,26425843-26425989,
26426306-26426366,26426570-26426604,26426688-26426882,
26428230-26428439,26428865-26428940,26429519-26429799
Length = 718
Score = 25.4 bits (53), Expect = 6.4
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 93 LRPKVRNLSSRSVMVCCKARGKSPQRAGP 179
LR VR+LSS ++ + RG SPQ AGP
Sbjct: 684 LRHAVRSLSS---IIRLQKRGLSPQPAGP 709
>12_02_1083 -
25922670-25922867,25922962-25923213,25923674-25923856,
25923945-25924015,25924058-25924169,25924524-25924583,
25924665-25924780,25925172-25925244
Length = 354
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 67 YIYYRARFSFDRRSE 111
Y YRA++ FDR SE
Sbjct: 307 YFIYRAKYDFDRASE 321
>11_03_0212 -
11761856-11762037,11762302-11762398,11763571-11764545,
11766172-11766263,11766450-11766510
Length = 468
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 49 NVLKTIYIYYRARFSFDRRSETCRQGQSWCAARRVESLHKGQDL 180
N KT+ + R + SF+R+S+ +++C + +HK QDL
Sbjct: 253 NPNKTLCYHSRTKNSFERKSQNQISAEAFCTNNEI-LVHK-QDL 294
>11_01_0145 +
1204021-1204296,1204430-1204492,1204667-1204795,
1205778-1205834,1205915-1206213,1206539-1206630,
1206747-1206961,1207142-1207325,1207447-1207541,
1208572-1208628,1209372-1209426,1209955-1210079
Length = 548
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 68 IFITGLGLASTEGPKPVVKVSHG--VLQGAWKVST 166
+ + G GL +T+ V KV HG ++ AW + T
Sbjct: 433 LLVDGFGLEATKEITLVEKVKHGESYIEAAWPLGT 467
>07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323
Length = 340
Score = 25.0 bits (52), Expect = 8.5
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = +3
Query: 138 CCKARGKSPQRAGPMPVFRVYXYAQPPIGEYRF 236
CC+ R SP + P R++ P Y F
Sbjct: 281 CCRGRFASPDKCAPSEYSRLFKAQCPQAYSYAF 313
>07_01_0467 -
3524598-3524837,3524939-3525466,3526242-3526892,
3527015-3527500,3527580-3527792,3527885-3528174,
3528276-3528418,3528633-3528855,3528983-3529160,
3529598-3529867
Length = 1073
Score = 25.0 bits (52), Expect = 8.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 17 LHRRFHLSNIKMFLKLFIFITGLGLASTEGPKPVVKVSHGVLQ 145
LHR H ++ + L F L L T+G PV +S V Q
Sbjct: 99 LHRALHFGHLCVASVLLQFGASLALEDTKGRTPVDLLSGPVSQ 141
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 25.0 bits (52), Expect = 8.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 29 FHLSNIKMFLKLFIFITGLGLAST 100
FHL N+ FL I ++ +GLA T
Sbjct: 259 FHLGNVISFLATPIIMSHIGLAGT 282
>04_01_0333 - 4391571-4392289,4393048-4393159
Length = 276
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/38 (31%), Positives = 15/38 (39%)
Frame = +3
Query: 123 RSVMVCCKARGKSPQRAGPMPVFRVYXYAQPPIGEYRF 236
RS CC SP GP +V+ A P Y +
Sbjct: 216 RSARYCCTGAYGSPAACGPTDYSQVFKAACPAAYSYAY 253
>01_05_0737 - 24780952-24781100,24781515-24783453
Length = 695
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 144 KARGKSPQRAGPMP 185
KA GK+P++AGP P
Sbjct: 637 KADGKAPRQAGPQP 650
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,340,271
Number of Sequences: 37544
Number of extensions: 132299
Number of successful extensions: 350
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 350
length of database: 14,793,348
effective HSP length: 61
effective length of database: 12,503,164
effective search space used: 262566444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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