Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_O16
         (472 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    33   0.001
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   3.3  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 33.1 bits (72), Expect = 0.001
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 29  VQFFIHS*WRRTSPLTRVKMSQPYERSNKRQCESRARNVTRECLQQ 166
           + FFI+  W++TS LT  K+   Y +   RQ +S     T +C+ Q
Sbjct: 18  ILFFIYLYWQQTSNLTTSKLLYTYRQPYPRQKKSHPPQWTWQCINQ 63


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +2

Query: 158 LQQTPVLLH-SNSPSTFTASKHSWTIKSISTSTQT 259
           L   P+  H    PS FT+S H ++I  +  + ++
Sbjct: 347 LHHNPMSHHLKQEPSGFTSSNHPFSINRLLPTAES 381


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,769
Number of Sequences: 336
Number of extensions: 1699
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)