Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_O16
(472 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 36 0.011
U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with... 32 0.18
U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with... 32 0.18
AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-medi... 32 0.18
Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical pr... 31 0.42
Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical pr... 31 0.42
AF014940-3|AAB63935.2| 232|Caenorhabditis elegans Hypothetical ... 29 1.3
AF014940-2|AAB63934.1| 232|Caenorhabditis elegans Hypothetical ... 29 1.7
Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical pr... 28 3.9
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 3.9
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 27 5.1
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 27 5.1
Z83119-1|CAB05578.1| 250|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical p... 27 9.0
Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 9.0
U41550-4|AAP31434.3| 412|Caenorhabditis elegans Hypothetical pr... 27 9.0
U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical p... 27 9.0
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 27 9.0
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 36.3 bits (80), Expect = 0.011
Identities = 26/59 (44%), Positives = 31/59 (52%)
Frame = +2
Query: 167 TPVLLHSNSPSTFTASKHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGKQSTEMSSNK 343
TP+ HS SPST T+ T S STST T+R + PTT S ST SS+K
Sbjct: 89 TPIPTHS-SPSTSTS-----TSTSTSTSTSTSRSTSTVTPTTRSSTTTTATSTPTSSSK 141
>U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform a
protein.
Length = 2322
Score = 32.3 bits (70), Expect = 0.18
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 77 RVKMSQPYERSNKRQCESRARNV--TRECLQQTPVLLHSNSPSTFTASKHSWTIKSISTS 250
R MS Y+ S +RQ ++ E + T LL +P+TF ++SW + + T
Sbjct: 662 RQSMSTVYQMSQERQQKTITSTSFGAEEFIIITNFLLKQATPTTFKKGQNSWMDEVLETF 721
Query: 251 TQTARGSLAKRPTTLGSLFVGK 316
TQ R +L K + + F+ K
Sbjct: 722 TQGCR-TLEKPDSYVPETFIEK 742
>U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform b
protein.
Length = 2019
Score = 32.3 bits (70), Expect = 0.18
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 77 RVKMSQPYERSNKRQCESRARNV--TRECLQQTPVLLHSNSPSTFTASKHSWTIKSISTS 250
R MS Y+ S +RQ ++ E + T LL +P+TF ++SW + + T
Sbjct: 662 RQSMSTVYQMSQERQQKTITSTSFGAEEFIIITNFLLKQATPTTFKKGQNSWMDEVLETF 721
Query: 251 TQTARGSLAKRPTTLGSLFVGK 316
TQ R +L K + + F+ K
Sbjct: 722 TQGCR-TLEKPDSYVPETFIEK 742
>AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans
nonsense-mediated mRNA decay proteinSMG-1 protein.
Length = 2322
Score = 32.3 bits (70), Expect = 0.18
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +2
Query: 77 RVKMSQPYERSNKRQCESRARNV--TRECLQQTPVLLHSNSPSTFTASKHSWTIKSISTS 250
R MS Y+ S +RQ ++ E + T LL +P+TF ++SW + + T
Sbjct: 662 RQSMSTVYQMSQERQQKTITSTSFGAEEFIIITNFLLKQATPTTFKKGQNSWMDEVLETF 721
Query: 251 TQTARGSLAKRPTTLGSLFVGK 316
TQ R +L K + + F+ K
Sbjct: 722 TQGCR-TLEKPDSYVPETFIEK 742
>Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 31.1 bits (67), Expect = 0.42
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 167 TPVLLHSNSPSTFTASKHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGK-QSTEMSSNK 343
+P L S+ PS FTA + + S++TST T L P L + K T M++
Sbjct: 57 SPTGLSSSGPSAFTAVSPTNSANSLTTSTATIYNRLMCIPKLLQEISNNKVLRTRMNNTA 116
Query: 344 YK 349
YK
Sbjct: 117 YK 118
>Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 31.1 bits (67), Expect = 0.42
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 167 TPVLLHSNSPSTFTASKHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGK-QSTEMSSNK 343
+P L S+ PS FTA + + S++TST T L P L + K T M++
Sbjct: 57 SPTGLSSSGPSAFTAVSPTNSANSLTTSTATIYNRLMCIPKLLQEISNNKVLRTRMNNTA 116
Query: 344 YK 349
YK
Sbjct: 117 YK 118
>AF014940-3|AAB63935.2| 232|Caenorhabditis elegans Hypothetical
protein W02D7.5 protein.
Length = 232
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 139 KRYQ-GVFATNTSPLTQQLAIDIHGFEALLDYQINQYVDSNGERIFGKASDDVRVIVC 309
K+Y G + TS L Q+ + GF+ L + + VDS G R+ DD +C
Sbjct: 163 KKYNIGGVLSETSSLANQIVLQKAGFKCLKELPYSAIVDSKGNRVL--RPDDGTTSLC 218
>AF014940-2|AAB63934.1| 232|Caenorhabditis elegans Hypothetical
protein W02D7.4 protein.
Length = 232
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +1
Query: 16 PKGKGTILHSFVMATDKSLNARENVAAIRALEQATMRIAREKRYQGVFATNTSPLTQQLA 195
P +I+H + + R +A T R ++ GV + TS L Q+
Sbjct: 125 PPNVNSIIHREIGSVAPQFT-RLGIATKMVTTNMTKRNLKKYNIGGVLSETTS-LANQIV 182
Query: 196 IDIHGFEALLDYQINQYVDSNGERI 270
++ GF+ L + + VDS G ++
Sbjct: 183 LEKAGFKCLKELPYSTIVDSKGNQV 207
>Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical
protein C41G7.3 protein.
Length = 553
Score = 27.9 bits (59), Expect = 3.9
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Frame = +2
Query: 110 NKRQCESRARNVTRECLQQTPVLLHSNSP--------STFTASKHSWTIKSISTSTQTAR 265
NK QC+ ARN +Q SN P S FT+ S T + S Q R
Sbjct: 294 NKEQCQE-ARNAVMSLMQSHQDKPASNPPDSGFSTPGSPFTSDSSSTTPEKRGNSRQYHR 352
Query: 266 GSLAKRPTTLGSL---FVGKQSTEMSS 337
GS +P + +L F+ K+ +++
Sbjct: 353 GSFRDQPKVMLALTPQFIDKEHCRLAA 379
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 3.9
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 191 SPSTFTASKHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGKQSTEMSSN 340
+PST +++ S + +SI +ST GS PT + G ST+ +SN
Sbjct: 1561 NPSTSSSTSGSSSTQSIPSSTAANTGSSTSGPTV--ATTQGSSSTQTNSN 1608
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 185 SNSPSTFTASKHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGKQSTEMS 334
S+S S T++ S S TST TAR + PTT + + ST S
Sbjct: 212 SSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTS 261
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.5 bits (58), Expect = 5.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 185 SNSPSTFTASKHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGKQSTEMS 334
S+S S T++ S S TST TAR + PTT + + ST S
Sbjct: 194 SSSTSRSTSTPSSTEASSTVTSTTTARTTTTMIPTTPTTTTIASTSTVTS 243
>Z83119-1|CAB05578.1| 250|Caenorhabditis elegans Hypothetical
protein R05H10.1 protein.
Length = 250
Score = 27.1 bits (57), Expect = 6.8
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 121 MRIAREKRYQGVFATNTSPLTQQLAIDIHGFEALLDYQINQYVDSNGERI 270
M AR G+ + TS Q + +GF+ L ++ + V SNG+++
Sbjct: 158 MSAARLHNVDGIVSA-TSSFANQTLLAKNGFQCLKEFPYSGIVSSNGDKL 206
>Z83117-6|CAN86902.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 215 KHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGKQSTE 328
K+ +K + + + A G + RP+ GS +QSTE
Sbjct: 717 KYKQRMKRVKHAQKKAMGVFSSRPSRTGSGIASRQSTE 754
>Z83117-5|CAN86901.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 215 KHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGKQSTE 328
K+ +K + + + A G + RP+ GS +QSTE
Sbjct: 757 KYKQRMKRVKHAQKKAMGVFSSRPSRTGSGIASRQSTE 794
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 215 KHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGKQSTE 328
K+ +K + + + A G + RP+ GS +QSTE
Sbjct: 818 KYKQRMKRVKHAQKKAMGVFSSRPSRTGSGIASRQSTE 855
>Z80219-10|CAN86596.1| 1931|Caenorhabditis elegans Hypothetical
protein T01H8.5d protein.
Length = 1931
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 215 KHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGKQSTE 328
K+ +K + + + A G + RP+ GS +QSTE
Sbjct: 717 KYKQRMKRVKHAQKKAMGVFSSRPSRTGSGIASRQSTE 754
>Z80219-9|CAN86595.1| 1971|Caenorhabditis elegans Hypothetical
protein T01H8.5c protein.
Length = 1971
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 215 KHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGKQSTE 328
K+ +K + + + A G + RP+ GS +QSTE
Sbjct: 757 KYKQRMKRVKHAQKKAMGVFSSRPSRTGSGIASRQSTE 794
>Z80219-8|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical
protein T01H8.5a protein.
Length = 2032
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 215 KHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGKQSTE 328
K+ +K + + + A G + RP+ GS +QSTE
Sbjct: 818 KYKQRMKRVKHAQKKAMGVFSSRPSRTGSGIASRQSTE 855
>U41550-4|AAP31434.3| 412|Caenorhabditis elegans Hypothetical
protein R04A9.5 protein.
Length = 412
Score = 26.6 bits (56), Expect = 9.0
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -2
Query: 216 FEAVNVDGELLCKRTGVCCKHSLVTFLARDS 124
FE + DG++ C+ CC+ + FL+R++
Sbjct: 236 FETIRKDGKIECETNDACCR--IREFLSRET 264
>U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical
protein ZK1248.15 protein.
Length = 471
Score = 26.6 bits (56), Expect = 9.0
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +3
Query: 102 SARTSDNANRARETLPGSVCNKHQSSYTATRHRHSRLRSTLGLSNQSVRRLKRREDL 272
S+R S N++R + T N H + YT+ ++ R N++V+ +K+ +L
Sbjct: 321 SSRKSSNSDRRQTTRKEHHANSHSNKYTSNDIKYKR--------NEAVKSVKKHREL 369
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 215 KHSWTIKSISTSTQTARGSLAKRPTTLGSLFVGKQSTE 328
K+ +K + + + A G + RP+ GS +QSTE
Sbjct: 757 KYKQRMKRVKHAQKKAMGVFSSRPSRTGSGIASRQSTE 794
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,576,728
Number of Sequences: 27780
Number of extensions: 175260
Number of successful extensions: 570
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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