Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_O15
(302 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein... 94 8e-20
AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein... 94 8e-20
BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif prote... 39 0.002
AL732292-3|CAM28277.1| 408|Homo sapiens novel protein protein. 39 0.002
AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif prote... 39 0.002
AL133418-4|CAM28326.1| 408|Homo sapiens novel protein protein. 39 0.002
AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif prote... 39 0.002
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 38 0.004
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 38 0.004
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 38 0.004
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 38 0.004
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 38 0.004
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 38 0.004
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 38 0.004
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 38 0.004
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 33 0.12
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 33 0.12
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 33 0.12
D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein. 33 0.16
BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation ... 33 0.16
BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation ... 33 0.16
BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation ... 33 0.16
AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein. 33 0.16
AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spli... 33 0.16
AC005057-2|AAS07440.1| 136|Homo sapiens unknown protein. 33 0.16
AC005057-1|AAS07439.1| 156|Homo sapiens unknown protein. 33 0.16
BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein. 33 0.22
BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor, argini... 33 0.22
BC047322-1|AAH47322.1| 386|Homo sapiens Similar to expressed se... 33 0.22
AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor, argini... 33 0.22
L41887-1|AAA88098.1| 238|Homo sapiens splicing factor, arginine... 32 0.29
L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein. 32 0.29
BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor, argini... 32 0.29
BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor, argini... 32 0.29
BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor, argini... 32 0.29
BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor, argini... 32 0.29
BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor, argini... 32 0.29
AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protei... 32 0.29
AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich sp... 32 0.29
AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein. 32 0.29
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 32 0.38
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 32 0.38
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 32 0.38
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 31 0.50
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 31 0.50
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 31 0.50
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 30 1.2
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 30 1.2
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 30 1.2
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 30 1.2
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 30 1.2
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 30 1.2
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 30 1.2
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 30 1.2
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 30 1.2
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 30 1.2
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 30 1.2
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 30 1.2
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 30 1.2
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 30 1.2
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 30 1.2
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 30 1.2
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 30 1.2
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 30 1.2
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 30 1.2
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 30 1.2
D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein. 29 2.0
BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma... 29 2.0
BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma... 29 2.0
AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma... 29 2.0
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 29 3.5
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 28 4.7
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 28 4.7
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 28 4.7
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 28 4.7
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 28 4.7
BC114220-1|AAI14221.1| 1703|Homo sapiens BCOR protein protein. 28 4.7
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 28 4.7
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 28 4.7
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 28 4.7
BC009675-1|AAH09675.2| 361|Homo sapiens BCOR protein protein. 28 4.7
AY316592-1|AAR08265.1| 1755|Homo sapiens BCL-6 corepressor long ... 28 4.7
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 28 4.7
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 28 4.7
AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 28 4.7
AF317391-1|AAG41429.1| 1721|Homo sapiens BCL-6 corepressor protein. 28 4.7
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 28 6.2
BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repress... 27 8.1
>BC010939-1|AAH10939.1| 306|Homo sapiens poly(A) binding protein,
nuclear 1 protein.
Length = 306
Score = 93.9 bits (223), Expect = 8e-20
Identities = 40/50 (80%), Positives = 49/50 (98%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNR 151
GHPKGFAYIEF DK+SV+T++A+DESLFRGRQIKV+PKRTN+PGIS+T+R
Sbjct: 210 GHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDR 259
>AF026029-1|AAC39596.1| 306|Homo sapiens poly(A) binding protein II
protein.
Length = 306
Score = 93.9 bits (223), Expect = 8e-20
Identities = 40/50 (80%), Positives = 49/50 (98%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNR 151
GHPKGFAYIEF DK+SV+T++A+DESLFRGRQIKV+PKRTN+PGIS+T+R
Sbjct: 210 GHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDR 259
>BC029451-1|AAH29451.1| 425|Homo sapiens RNA binding motif protein
34 protein.
Length = 425
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPPR 160
G KGF Y+ F + DSV A+ ++ S GR+++VM + NK N PR
Sbjct: 320 GIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVM-RSVNKEKFKQQNSNPR 371
>AL732292-3|CAM28277.1| 408|Homo sapiens novel protein protein.
Length = 408
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPPR 160
G KGF Y+ F + DSV A+ ++ S GR+++VM + NK N PR
Sbjct: 303 GIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVM-RSVNKEKFKQQNSNPR 354
>AL732292-2|CAI21936.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPPR 160
G KGF Y+ F + DSV A+ ++ S GR+++VM + NK N PR
Sbjct: 325 GIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVM-RSVNKEKFKQQNSNPR 376
>AL133418-4|CAM28326.1| 408|Homo sapiens novel protein protein.
Length = 408
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPPR 160
G KGF Y+ F + DSV A+ ++ S GR+++VM + NK N PR
Sbjct: 303 GIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVM-RSVNKEKFKQQNSNPR 354
>AL133418-3|CAI22960.1| 430|Homo sapiens RNA binding motif protein
34 protein.
Length = 430
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPPR 160
G KGF Y+ F + DSV A+ ++ S GR+++VM + NK N PR
Sbjct: 325 GIGKGFGYVLFENTDSVHLALKLNNSELMGRKLRVM-RSVNKEKFKQQNSNPR 376
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMPKRTNKPGISSTNR---PPR 160
+GFA++ F DK + AM AMD ++ GR+++V R +P S +R PPR
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPR 108
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMPKRTNKPGISSTNR---PPR 160
+GFA++ F DK + AM AMD ++ GR+++V R +P S +R PPR
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPR 108
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMPKRTNKPGISSTNR---PPR 160
+GFA++ F DK + AM AMD ++ GR+++V R +P S +R PPR
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPR 108
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMPKRTNKPGISSTNR---PPR 160
+GFA++ F DK + AM AMD ++ GR+++V R +P S +R PPR
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPR 108
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMPKRTNKPGISSTNR---PPR 160
+GFA++ F DK + AM AMD ++ GR+++V R +P S +R PPR
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPR 108
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMPKRTNKPGISSTNR---PPR 160
+GFA++ F DK + AM AMD ++ GR+++V R +P S +R PPR
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPR 108
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMPKRTNKPGISSTNR---PPR 160
+GFA++ F DK + AM AMD ++ GR+++V R +P S +R PPR
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPR 108
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMPKRTNKPGISSTNR---PPR 160
+GFA++ F DK + AM AMD ++ GR+++V R +P S +R PPR
Sbjct: 55 RGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPR 108
>X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF
protein.
Length = 475
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 130
K FA++EF D AMA D +F+G+ +K+ +P
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
>BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 130
K FA++EF D AMA D +F+G+ +K+ +P
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
>BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA
auxiliary factor 2 protein.
Length = 471
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 130
K FA++EF D AMA D +F+G+ +K+ +P
Sbjct: 195 KNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQP 234
>D26068-1|BAA05063.1| 230|Homo sapiens KIAA0038 protein.
Length = 230
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
KGF Y+EF + DS++ A+ D +L R ++V
Sbjct: 84 KGFCYVEFDEVDSLKEALTYDGALLGDRSLRV 115
>BC066928-1|AAH66928.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
KGF Y+EF + DS++ A+ D +L R ++V
Sbjct: 82 KGFCYVEFDEVDSLKEALTYDGALLGDRSLRV 113
>BC021214-1|AAH21214.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
KGF Y+EF + DS++ A+ D +L R ++V
Sbjct: 82 KGFCYVEFDEVDSLKEALTYDGALLGDRSLRV 113
>BC010021-1|AAH10021.1| 228|Homo sapiens eukaryotic translation
initiation factor 4H protein.
Length = 228
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
KGF Y+EF + DS++ A+ D +L R ++V
Sbjct: 82 KGFCYVEFDEVDSLKEALTYDGALLGDRSLRV 113
>AF045555-2|AAF75557.1| 228|Homo sapiens wbscr1 protein.
Length = 228
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
KGF Y+EF + DS++ A+ D +L R ++V
Sbjct: 82 KGFCYVEFDEVDSLKEALTYDGALLGDRSLRV 113
>AF045555-1|AAC04859.2| 248|Homo sapiens wbscr1 alternative spliced
product protein.
Length = 248
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
KGF Y+EF + DS++ A+ D +L R ++V
Sbjct: 82 KGFCYVEFDEVDSLKEALTYDGALLGDRSLRV 113
>AC005057-2|AAS07440.1| 136|Homo sapiens unknown protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
KGF Y+EF + DS++ A+ D +L R ++V
Sbjct: 82 KGFCYVEFDEVDSLKEALTYDGALLGDRSLRV 113
>AC005057-1|AAS07439.1| 156|Homo sapiens unknown protein.
Length = 156
Score = 33.1 bits (72), Expect = 0.16
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
KGF Y+EF + DS++ A+ D +L R ++V
Sbjct: 82 KGFCYVEFDEVDSLKEALTYDGALLGDRSLRV 113
>BC112343-1|AAI12344.1| 508|Homo sapiens SFRS12 protein protein.
Length = 508
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
P FA++EF D++SV A+A + +F R +K+
Sbjct: 105 PTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 137
>BC067770-1|AAH67770.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
P FA++EF D++SV A+A + +F R +K+
Sbjct: 105 PTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 137
>BC047322-1|AAH47322.1| 386|Homo sapiens Similar to expressed
sequence AI450757 protein.
Length = 386
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
P FA++EF D++SV A+A + +F R +K+
Sbjct: 221 PTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 253
>AF459094-1|AAL67778.1| 508|Homo sapiens splicing factor,
arginine/serine-rich 12 protein.
Length = 508
Score = 32.7 bits (71), Expect = 0.22
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
P FA++EF D++SV A+A + +F R +K+
Sbjct: 105 PTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 137
>L41887-1|AAA88098.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7 protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPP 157
+P GFA++EF D +D+ +D + G +++V T P S +RPP
Sbjct: 45 NPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV-ELSTGMPRRSRFDRPP 95
>L22253-1|AAA35495.1| 238|Homo sapiens 9G8 splicing factor protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPP 157
+P GFA++EF D +D+ +D + G +++V T P S +RPP
Sbjct: 45 NPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV-ELSTGMPRRSRFDRPP 95
>BT006745-1|AAP35391.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPP 157
+P GFA++EF D +D+ +D + G +++V T P S +RPP
Sbjct: 45 NPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV-ELSTGMPRRSRFDRPP 95
>BC022328-1|AAH22328.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPP 157
+P GFA++EF D +D+ +D + G +++V T P S +RPP
Sbjct: 45 NPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV-ELSTGMPRRSRFDRPP 95
>BC017908-1|AAH17908.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPP 157
+P GFA++EF D +D+ +D + G +++V T P S +RPP
Sbjct: 45 NPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV-ELSTGMPRRSRFDRPP 95
>BC017369-1|AAH17369.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPP 157
+P GFA++EF D +D+ +D + G +++V T P S +RPP
Sbjct: 45 NPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV-ELSTGMPRRSRFDRPP 95
>BC000997-1|AAH00997.1| 238|Homo sapiens splicing factor,
arginine/serine-rich 7, 35kDa protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPP 157
+P GFA++EF D +D+ +D + G +++V T P S +RPP
Sbjct: 45 NPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV-ELSTGMPRRSRFDRPP 95
>AY513287-1|AAT08040.1| 238|Homo sapiens aging-associated protein 3
protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPP 157
+P GFA++EF D +D+ +D + G +++V T P S +RPP
Sbjct: 45 NPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV-ELSTGMPRRSRFDRPP 95
>AY166860-1|AAN87842.1| 238|Homo sapiens arginine/serine-rich
splicing factor 7 type B protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPP 157
+P GFA++EF D +D+ +D + G +++V T P S +RPP
Sbjct: 45 NPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV-ELSTGMPRRSRFDRPP 95
>AC074366-2|AAX93102.1| 238|Homo sapiens unknown protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPP 157
+P GFA++EF D +D+ +D + G +++V T P S +RPP
Sbjct: 45 NPPGFAFVEFEDPRDAEDAVRGLDGKVICGSRVRV-ELSTGMPRRSRFDRPP 95
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTA-MAMDESLFRGRQIKVMPKR 118
P+GFA++ F D+ Q A AMD + GR+++V R
Sbjct: 54 PRGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVAR 91
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTA-MAMDESLFRGRQIKVMPKR 118
P+GFA++ F D+ Q A AMD + GR+++V R
Sbjct: 44 PRGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVAR 81
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 31.9 bits (69), Expect = 0.38
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTA-MAMDESLFRGRQIKVMPKR 118
P+GFA++ F D+ Q A AMD + GR+++V R
Sbjct: 54 PRGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVAR 91
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 8 PKGFAYIEFG-DKDSVQTAMAMDESLFRGRQIKVMPKRTNK 127
PKGFA+I F + +V+ +D +F+GR + V+P K
Sbjct: 442 PKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKK 482
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 8 PKGFAYIEFG-DKDSVQTAMAMDESLFRGRQIKVMPKRTNK 127
PKGFA+I F + +V+ +D +F+GR + V+P K
Sbjct: 442 PKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKK 482
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 31.5 bits (68), Expect = 0.50
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 8 PKGFAYIEFG-DKDSVQTAMAMDESLFRGRQIKVMPKRTNK 127
PKGFA+I F + +V+ +D +F+GR + V+P K
Sbjct: 455 PKGFAFITFMFPEHAVKAYSEVDGQVFQGRMLHVLPSTIKK 495
>BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein.
Length = 173
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2
protein.
Length = 183
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38
protein.
Length = 262
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein
2 protein.
Length = 262
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein
1 protein.
Length = 183
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 173
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein
(serine-arginine rich) 1 isoform 2 variant protein.
Length = 262
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
Homo sapiens TLS-associated protein TASR-2 mRNA. ).
Length = 183
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein.
Length = 262
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein
TASR-1 protein.
Length = 183
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 262
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein
TASR protein.
Length = 183
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ +D GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEI 83
>D63879-1|BAA09929.1| 963|Homo sapiens KIAA0156 protein.
Length = 963
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 2 GHPKGFAYIEF-GDKDSVQTAMAMDESLFRGRQIKVM---PKRTNKPGISSTNRPP 157
G PKG AY+E+ + + Q M MD + IKV P + P T + P
Sbjct: 838 GKPKGLAYVEYENESQASQAVMKMDGMTIKENIIKVAISNPPQRKVPEKPETRKAP 893
>BC111983-1|AAI11984.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 2 GHPKGFAYIEF-GDKDSVQTAMAMDESLFRGRQIKVM---PKRTNKPGISSTNRPP 157
G PKG AY+E+ + + Q M MD + IKV P + P T + P
Sbjct: 838 GKPKGLAYVEYENESQASQAVMKMDGMTIKENIIKVAISNPPQRKVPEKPETRKAP 893
>BC093784-1|AAH93784.1| 963|Homo sapiens squamous cell carcinoma
antigen recognized by T cells 3 protein.
Length = 963
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 2 GHPKGFAYIEF-GDKDSVQTAMAMDESLFRGRQIKVM---PKRTNKPGISSTNRPP 157
G PKG AY+E+ + + Q M MD + IKV P + P T + P
Sbjct: 838 GKPKGLAYVEYENESQASQAVMKMDGMTIKENIIKVAISNPPQRKVPEKPETRKAP 893
>AB020880-1|BAA78384.1| 963|Homo sapiens squamous cell carcinoma
antigen SART-3 protein.
Length = 963
Score = 29.5 bits (63), Expect = 2.0
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +2
Query: 2 GHPKGFAYIEF-GDKDSVQTAMAMDESLFRGRQIKVM---PKRTNKPGISSTNRPP 157
G PKG AY+E+ + + Q M MD + IKV P + P T + P
Sbjct: 838 GKPKGLAYVEYENESQASQAVMKMDGMTIKENIIKVAISNPPQRKVPEKPETRKAP 893
>BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein.
Length = 269
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQ--IKVMPKRTNK 127
G KGF ++ F + QTAM ++ F G Q I + PK+ +
Sbjct: 49 GKSKGFGFVSFERHEDPQTAMDVNGKEFSGNQTYICLAPKKVEE 92
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKV 106
G PKG+ + E+ D+++ +AM ++ F GR ++V
Sbjct: 45 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 80
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKV 106
G PKG+ + E+ D+++ +AM ++ F GR ++V
Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKV 106
G PKG+ + E+ D+++ +AM ++ F GR ++V
Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKV 106
G PKG+ + E+ D+++ +AM ++ F GR ++V
Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKV 106
G PKG+ + E+ D+++ +AM ++ F GR ++V
Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
>BC114220-1|AAI14221.1| 1703|Homo sapiens BCOR protein protein.
Length = 1703
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 145 EPSATYDARPRTRVPRRFLAILRRLPARTSRQV 243
EPS+ YD P + P+ F + + LPA S Q+
Sbjct: 1350 EPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQL 1382
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKV 106
G PKG+ + E+ D+++ +AM ++ F GR ++V
Sbjct: 53 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 88
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKV 106
G PKG+ + E+ D+++ +AM ++ F GR ++V
Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKV 106
G PKG+ + E+ D+++ +AM ++ F GR ++V
Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
>BC009675-1|AAH09675.2| 361|Homo sapiens BCOR protein protein.
Length = 361
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 145 EPSATYDARPRTRVPRRFLAILRRLPARTSRQV 243
EPS+ YD P + P+ F + + LPA S Q+
Sbjct: 8 EPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQL 40
>AY316592-1|AAR08265.1| 1755|Homo sapiens BCL-6 corepressor long
isoform protein.
Length = 1755
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 145 EPSATYDARPRTRVPRRFLAILRRLPARTSRQV 243
EPS+ YD P + P+ F + + LPA S Q+
Sbjct: 1402 EPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQL 1434
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKV 106
G PKG+ + E+ D+++ +AM ++ F GR ++V
Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKV 106
G PKG+ + E+ D+++ +AM ++ F GR ++V
Sbjct: 54 GKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV 89
>AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein.
Length = 261
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P+GFAY++F D +D+ ++ GRQI++
Sbjct: 50 PRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEI 83
>AF317391-1|AAG41429.1| 1721|Homo sapiens BCL-6 corepressor protein.
Length = 1721
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 145 EPSATYDARPRTRVPRRFLAILRRLPARTSRQV 243
EPS+ YD P + P+ F + + LPA S Q+
Sbjct: 1368 EPSSDYDLSPAKQEPKPFDRLQQLLPASQSTQL 1400
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPPR 160
G KGFA++ F D DSV + G +V K +K ++S + R
Sbjct: 143 GKKKGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVR-KALSKQEMASASSSQR 194
>BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repressor
protein (35 kDa) protein.
Length = 261
Score = 27.5 bits (58), Expect = 8.1
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
P+GFAY++F D + A+ ++ GRQI++
Sbjct: 50 PRGFAYVQFEDVRGAEDALYNLNRKWVCGRQIEI 83
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,594,957
Number of Sequences: 237096
Number of extensions: 635158
Number of successful extensions: 1680
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 1655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 76,859,062
effective HSP length: 77
effective length of database: 58,602,670
effective search space used: 1347861410
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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