Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_O15
(302 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L34934-1|AAA73522.1| 224|Drosophila melanogaster RNA binding pr... 91 3e-19
AY075519-1|AAL68327.1| 224|Drosophila melanogaster RE69521p pro... 91 3e-19
AY070631-1|AAL48102.1| 224|Drosophila melanogaster RE74211p pro... 91 3e-19
AF116341-1|AAF00976.1| 224|Drosophila melanogaster poly(A)-bind... 91 3e-19
AE013599-599|AAM68852.1| 224|Drosophila melanogaster CG2163-PB,... 91 3e-19
AE013599-598|AAF59127.1| 224|Drosophila melanogaster CG2163-PA,... 91 3e-19
AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p pro... 34 0.040
AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family sp... 34 0.040
AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB... 34 0.040
AY095099-1|AAM11427.1| 984|Drosophila melanogaster SD09402p pro... 33 0.069
AE014296-288|AAF47514.1| 985|Drosophila melanogaster CG7879-PB,... 33 0.069
AE014296-287|AAF47513.1| 985|Drosophila melanogaster CG7879-PA,... 33 0.069
M25545-4|AAA28621.1| 361|Drosophila melanogaster protein ( D.me... 33 0.092
M25545-3|AAA28624.1| 365|Drosophila melanogaster protein ( D.me... 33 0.092
M25545-2|AAA28623.1| 360|Drosophila melanogaster protein ( D.me... 33 0.092
M25545-1|AAA28622.1| 364|Drosophila melanogaster protein ( D.me... 33 0.092
M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protei... 33 0.092
AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p pro... 33 0.092
AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF... 33 0.092
AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD... 33 0.092
AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC... 33 0.092
AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB... 33 0.092
AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE... 33 0.092
AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA... 33 0.092
AE013599-3954|AAF47270.1| 250|Drosophila melanogaster CG3594-PA... 31 0.21
AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p pro... 31 0.28
AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA... 31 0.28
L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding pr... 31 0.37
BT023584-1|AAY84984.1| 291|Drosophila melanogaster IP09423p pro... 31 0.37
AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p pro... 31 0.37
AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA... 31 0.37
AE014296-1944|AAF50069.1| 291|Drosophila melanogaster CG11726-P... 31 0.37
L23873-1|AAA28862.1| 48|Drosophila melanogaster Rox2 protein. 30 0.65
BT003317-1|AAO25077.1| 545|Drosophila melanogaster GH01086p pro... 28 2.0
AY061006-1|AAL28554.1| 545|Drosophila melanogaster HL02140p pro... 28 2.0
AF479079-1|AAL86452.1| 637|Drosophila melanogaster half pint pr... 28 2.0
AF190745-1|AAF04132.1| 637|Drosophila melanogaster poly-U bindi... 28 2.0
AE014296-262|AAG22222.2| 545|Drosophila melanogaster CG12085-PD... 28 2.0
AE014296-261|AAF47502.1| 545|Drosophila melanogaster CG12085-PC... 28 2.0
AE014296-260|AAG22221.1| 545|Drosophila melanogaster CG12085-PB... 28 2.0
AE014296-259|AAF47501.1| 637|Drosophila melanogaster CG12085-PA... 28 2.0
L04929-1|AAA28850.1| 135|Drosophila melanogaster RNA binding pr... 28 2.6
BT015266-1|AAT94495.1| 459|Drosophila melanogaster LD33831p pro... 28 2.6
AY071474-1|AAL49096.1| 390|Drosophila melanogaster RE54950p pro... 28 2.6
AY069252-1|AAL39397.1| 144|Drosophila melanogaster GM02602p pro... 28 2.6
AE014297-1200|AAN13488.1| 106|Drosophila melanogaster CG17136-P... 28 2.6
AE014297-1199|AAN13487.1| 144|Drosophila melanogaster CG17136-P... 28 2.6
AE014297-1198|AAN13486.1| 135|Drosophila melanogaster CG17136-P... 28 2.6
AE014297-1197|AAF54555.1| 135|Drosophila melanogaster CG17136-P... 28 2.6
L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprot... 27 6.0
L02106-1|AAA99873.1| 471|Drosophila melanogaster ribonucleoprot... 27 6.0
BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p pro... 27 6.0
BT001320-1|AAN71075.1| 434|Drosophila melanogaster AT15526p pro... 27 6.0
AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage sti... 27 6.0
AE014297-4014|AAX53003.1| 434|Drosophila melanogaster CG6354-PE... 27 6.0
AE014297-4013|AAX53002.1| 434|Drosophila melanogaster CG6354-PD... 27 6.0
AE014297-4012|AAX53001.1| 471|Drosophila melanogaster CG6354-PI... 27 6.0
AE014297-4011|AAX53000.1| 471|Drosophila melanogaster CG6354-PH... 27 6.0
AE014297-4010|AAX52999.1| 471|Drosophila melanogaster CG6354-PF... 27 6.0
AE014297-4009|AAF56633.1| 471|Drosophila melanogaster CG6354-PB... 27 6.0
AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG... 27 6.0
AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC... 27 6.0
AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA... 27 6.0
AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA... 27 6.0
L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding pr... 26 8.0
BT022826-1|AAY55242.1| 293|Drosophila melanogaster IP13278p pro... 26 8.0
AY113490-1|AAM29495.1| 158|Drosophila melanogaster RE47308p pro... 26 8.0
AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p pro... 26 8.0
AE014298-1899|AAF48264.2| 158|Drosophila melanogaster CG1987-PA... 26 8.0
AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA... 26 8.0
>L34934-1|AAA73522.1| 224|Drosophila melanogaster RNA binding
protein protein.
Length = 224
Score = 90.6 bits (215), Expect = 3e-19
Identities = 39/50 (78%), Positives = 47/50 (94%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNR 151
GHPKGFAYIEFG K+ V+TA+AM+E+LFRGRQIKVM KRTN+PG+S+TNR
Sbjct: 134 GHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNR 183
>AY075519-1|AAL68327.1| 224|Drosophila melanogaster RE69521p
protein.
Length = 224
Score = 90.6 bits (215), Expect = 3e-19
Identities = 39/50 (78%), Positives = 47/50 (94%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNR 151
GHPKGFAYIEFG K+ V+TA+AM+E+LFRGRQIKVM KRTN+PG+S+TNR
Sbjct: 134 GHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNR 183
>AY070631-1|AAL48102.1| 224|Drosophila melanogaster RE74211p
protein.
Length = 224
Score = 90.6 bits (215), Expect = 3e-19
Identities = 39/50 (78%), Positives = 47/50 (94%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNR 151
GHPKGFAYIEFG K+ V+TA+AM+E+LFRGRQIKVM KRTN+PG+S+TNR
Sbjct: 134 GHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNR 183
>AF116341-1|AAF00976.1| 224|Drosophila melanogaster poly(A)-binding
protein II protein.
Length = 224
Score = 90.6 bits (215), Expect = 3e-19
Identities = 39/50 (78%), Positives = 47/50 (94%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNR 151
GHPKGFAYIEFG K+ V+TA+AM+E+LFRGRQIKVM KRTN+PG+S+TNR
Sbjct: 134 GHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNR 183
>AE013599-599|AAM68852.1| 224|Drosophila melanogaster CG2163-PB,
isoform B protein.
Length = 224
Score = 90.6 bits (215), Expect = 3e-19
Identities = 39/50 (78%), Positives = 47/50 (94%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNR 151
GHPKGFAYIEFG K+ V+TA+AM+E+LFRGRQIKVM KRTN+PG+S+TNR
Sbjct: 134 GHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNR 183
>AE013599-598|AAF59127.1| 224|Drosophila melanogaster CG2163-PA,
isoform A protein.
Length = 224
Score = 90.6 bits (215), Expect = 3e-19
Identities = 39/50 (78%), Positives = 47/50 (94%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNR 151
GHPKGFAYIEFG K+ V+TA+AM+E+LFRGRQIKVM KRTN+PG+S+TNR
Sbjct: 134 GHPKGFAYIEFGSKEFVETALAMNETLFRGRQIKVMSKRTNRPGLSTTNR 183
>AY069584-1|AAL39729.1| 195|Drosophila melanogaster LD32469p
protein.
Length = 195
Score = 33.9 bits (74), Expect = 0.040
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMPKRTNKP 130
+GFA++ F DK + A+ AMD + GR+++V R +P
Sbjct: 64 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMARYGRP 104
>AF232775-1|AAF43415.1| 195|Drosophila melanogaster SR family
splicing factor SC35 protein.
Length = 195
Score = 33.9 bits (74), Expect = 0.040
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMPKRTNKP 130
+GFA++ F DK + A+ AMD + GR+++V R +P
Sbjct: 64 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMARYGRP 104
>AE014134-2203|AAF53192.1| 195|Drosophila melanogaster CG5442-PB,
isoform B protein.
Length = 195
Score = 33.9 bits (74), Expect = 0.040
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMPKRTNKP 130
+GFA++ F DK + A+ AMD + GR+++V R +P
Sbjct: 64 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMARYGRP 104
>AY095099-1|AAM11427.1| 984|Drosophila melanogaster SD09402p
protein.
Length = 984
Score = 33.1 bits (72), Expect = 0.069
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMP 112
G G AY+EF S Q A+ + ++FR R I+++P
Sbjct: 391 GSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVP 427
>AE014296-288|AAF47514.1| 985|Drosophila melanogaster CG7879-PB,
isoform B protein.
Length = 985
Score = 33.1 bits (72), Expect = 0.069
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMP 112
G G AY+EF S Q A+ + ++FR R I+++P
Sbjct: 391 GSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVP 427
>AE014296-287|AAF47513.1| 985|Drosophila melanogaster CG7879-PA,
isoform A protein.
Length = 985
Score = 33.1 bits (72), Expect = 0.069
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMP 112
G G AY+EF S Q A+ + ++FR R I+++P
Sbjct: 391 GSRTGVAYVEFSRVSSAQKAVQRNNTMFRDRLIQIVP 427
>M25545-4|AAA28621.1| 361|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 361
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 156 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 202
>M25545-3|AAA28624.1| 365|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 365
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 160 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 206
>M25545-2|AAA28623.1| 360|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 360
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 155 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 201
>M25545-1|AAA28622.1| 364|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 364
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 159 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 205
>M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 160 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 206
>AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p
protein.
Length = 361
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 156 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 202
>AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF,
isoform F protein.
Length = 361
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 156 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 202
>AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD,
isoform D protein.
Length = 361
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 156 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 202
>AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC,
isoform C protein.
Length = 365
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 160 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 206
>AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB,
isoform B protein.
Length = 365
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 160 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 206
>AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE,
isoform E protein.
Length = 360
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 155 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 201
>AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA,
isoform A protein.
Length = 364
Score = 32.7 bits (71), Expect = 0.092
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQI---KVMPKRTNKPG 133
G +GFA++EF D D V + + G+ + K +PK+ ++ G
Sbjct: 159 GKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQG 205
>AE013599-3954|AAF47270.1| 250|Drosophila melanogaster CG3594-PA
protein.
Length = 250
Score = 31.5 bits (68), Expect = 0.21
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 14 GFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNK 127
GFA++E D S Q A + + +GR IKV K
Sbjct: 152 GFAFVEMADLSSFQNAFQLHNTELQGRNIKVQISEAGK 189
>AY075220-1|AAL68087.1| 449|Drosophila melanogaster AT16577p
protein.
Length = 449
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 130
K FA++EF D A+ D +FRG+ +K+ +P
Sbjct: 162 KNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQP 201
>AE013599-3557|AAF46969.1| 449|Drosophila melanogaster CG3162-PA
protein.
Length = 449
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 130
K FA++EF D A+ D +FRG+ +K+ +P
Sbjct: 162 KNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQP 201
>L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding
protein protein.
Length = 416
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRP 154
K FA++EF D AMA D +G+ +K+ +P T+ P
Sbjct: 139 KNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTP 186
>BT023584-1|AAY84984.1| 291|Drosophila melanogaster IP09423p
protein.
Length = 291
Score = 30.7 bits (66), Expect = 0.37
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGR 94
PKGFAY+E ++ + + MD+ RGR
Sbjct: 122 PKGFAYVEMDSREDLVRLLKMDKLKCRGR 150
>AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p
protein.
Length = 416
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRP 154
K FA++EF D AMA D +G+ +K+ +P T+ P
Sbjct: 139 KNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTP 186
>AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA
protein.
Length = 416
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRP 154
K FA++EF D AMA D +G+ +K+ +P T+ P
Sbjct: 139 KNFAFLEFRSIDETTQAMAFDGINLKGQSLKIRRPHDYQPMPGITDTP 186
>AE014296-1944|AAF50069.1| 291|Drosophila melanogaster CG11726-PA
protein.
Length = 291
Score = 30.7 bits (66), Expect = 0.37
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGR 94
PKGFAY+E ++ + + MD+ RGR
Sbjct: 122 PKGFAYVEMDSREDLVRLLKMDKLKCRGR 150
>L23873-1|AAA28862.1| 48|Drosophila melanogaster Rox2 protein.
Length = 48
Score = 29.9 bits (64), Expect = 0.65
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2
Query: 2 GHPKGFAYIEF 34
GHPKGFAYIEF
Sbjct: 38 GHPKGFAYIEF 48
>BT003317-1|AAO25077.1| 545|Drosophila melanogaster GH01086p
protein.
Length = 545
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
KGFA++E+ + Q A+ M+ +L GR IKV
Sbjct: 79 KGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 111
>AY061006-1|AAL28554.1| 545|Drosophila melanogaster HL02140p
protein.
Length = 545
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
KGFA++E+ + Q A+ M+ +L GR IKV
Sbjct: 79 KGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 111
>AF479079-1|AAL86452.1| 637|Drosophila melanogaster half pint
protein.
Length = 637
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
KGFA++E+ + Q A+ M+ +L GR IKV
Sbjct: 171 KGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 203
>AF190745-1|AAF04132.1| 637|Drosophila melanogaster poly-U binding
splicing factor protein.
Length = 637
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
KGFA++E+ + Q A+ M+ +L GR IKV
Sbjct: 171 KGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 203
>AE014296-262|AAG22222.2| 545|Drosophila melanogaster CG12085-PD,
isoform D protein.
Length = 545
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
KGFA++E+ + Q A+ M+ +L GR IKV
Sbjct: 79 KGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 111
>AE014296-261|AAF47502.1| 545|Drosophila melanogaster CG12085-PC,
isoform C protein.
Length = 545
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
KGFA++E+ + Q A+ M+ +L GR IKV
Sbjct: 79 KGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 111
>AE014296-260|AAG22221.1| 545|Drosophila melanogaster CG12085-PB,
isoform B protein.
Length = 545
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
KGFA++E+ + Q A+ M+ +L GR IKV
Sbjct: 79 KGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 111
>AE014296-259|AAF47501.1| 637|Drosophila melanogaster CG12085-PA,
isoform A protein.
Length = 637
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
KGFA++E+ + Q A+ M+ +L GR IKV
Sbjct: 171 KGFAFVEYEIPEGAQLALEQMNGALMGGRNIKV 203
>L04929-1|AAA28850.1| 135|Drosophila melanogaster RNA binding
protein protein.
Length = 135
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
+P GFA++EF D +D+ A+D + G +I+V
Sbjct: 45 NPPGFAFVEFEDRRDAEDATAALDGTRCCGTRIRV 79
>BT015266-1|AAT94495.1| 459|Drosophila melanogaster LD33831p
protein.
Length = 459
Score = 27.9 bits (59), Expect = 2.6
Identities = 8/35 (22%), Positives = 22/35 (62%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
G +GF Y+E +++ + +++ + +GR+I++
Sbjct: 118 GRSRGFGYVELENREDLIHVLSLPDPSIKGRRIRI 152
>AY071474-1|AAL49096.1| 390|Drosophila melanogaster RE54950p
protein.
Length = 390
Score = 27.9 bits (59), Expect = 2.6
Identities = 8/35 (22%), Positives = 22/35 (62%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
G +GF Y+E +++ + +++ + +GR+I++
Sbjct: 118 GRSRGFGYVELENREDLIHVLSLPDPSIKGRRIRI 152
>AY069252-1|AAL39397.1| 144|Drosophila melanogaster GM02602p
protein.
Length = 144
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
+P GFA++EF D +D+ A+D + G +I+V
Sbjct: 45 NPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRV 79
>AE014297-1200|AAN13488.1| 106|Drosophila melanogaster CG17136-PB,
isoform B protein.
Length = 106
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
+P GFA++EF D +D+ A+D + G +I+V
Sbjct: 45 NPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRV 79
>AE014297-1199|AAN13487.1| 144|Drosophila melanogaster CG17136-PD,
isoform D protein.
Length = 144
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
+P GFA++EF D +D+ A+D + G +I+V
Sbjct: 45 NPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRV 79
>AE014297-1198|AAN13486.1| 135|Drosophila melanogaster CG17136-PC,
isoform C protein.
Length = 135
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
+P GFA++EF D +D+ A+D + G +I+V
Sbjct: 45 NPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRV 79
>AE014297-1197|AAF54555.1| 135|Drosophila melanogaster CG17136-PA,
isoform A protein.
Length = 135
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
+P GFA++EF D +D+ A+D + G +I+V
Sbjct: 45 NPPGFAFVEFEDRRDAEDATRALDGTRCCGTRIRV 79
>L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprotein
protein.
Length = 465
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>L02106-1|AAA99873.1| 471|Drosophila melanogaster ribonucleoprotein
protein.
Length = 471
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>BT004860-1|AAO45216.1| 437|Drosophila melanogaster RE27227p
protein.
Length = 437
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKVMPKRTNK 127
G PKGF + E+ D+++ +AM ++ GR ++V T K
Sbjct: 54 GKPKGFGFCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEK 96
>BT001320-1|AAN71075.1| 434|Drosophila melanogaster AT15526p
protein.
Length = 434
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>AF170082-1|AAD47839.1| 419|Drosophila melanogaster cleavage
stimulation factor 64kilodalton subunit protein.
Length = 419
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKVMPKRTNK 127
G PKGF + E+ D+++ +AM ++ GR ++V T K
Sbjct: 54 GKPKGFGFCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEK 96
>AE014297-4014|AAX53003.1| 434|Drosophila melanogaster CG6354-PE,
isoform E protein.
Length = 434
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4013|AAX53002.1| 434|Drosophila melanogaster CG6354-PD,
isoform D protein.
Length = 434
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4012|AAX53001.1| 471|Drosophila melanogaster CG6354-PI,
isoform I protein.
Length = 471
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4011|AAX53000.1| 471|Drosophila melanogaster CG6354-PH,
isoform H protein.
Length = 471
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4010|AAX52999.1| 471|Drosophila melanogaster CG6354-PF,
isoform F protein.
Length = 471
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4009|AAF56633.1| 471|Drosophila melanogaster CG6354-PB,
isoform B protein.
Length = 471
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG,
isoform G protein.
Length = 465
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC,
isoform C protein.
Length = 465
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA,
isoform A protein.
Length = 465
Score = 26.6 bits (56), Expect = 6.0
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G +GFA++EF D D+V A+
Sbjct: 161 GKRRGFAFVEFDDYDAVDKAI 181
>AE014297-2555|AAF55577.2| 419|Drosophila melanogaster CG7697-PA
protein.
Length = 419
Score = 26.6 bits (56), Expect = 6.0
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKVMPKRTNK 127
G PKGF + E+ D+++ +AM ++ GR ++V T K
Sbjct: 54 GKPKGFGFCEYKDQETALSAMRNLNGYEIGGRTLRVDNACTEK 96
>L34935-1|AAA73521.1| 197|Drosophila melanogaster RNA binding
protein protein.
Length = 197
Score = 26.2 bits (55), Expect = 8.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 HPKGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
+P GFA++EF +D + A ++ S G Q++V
Sbjct: 41 NPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRV 75
>BT022826-1|AAY55242.1| 293|Drosophila melanogaster IP13278p
protein.
Length = 293
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 217 LPARTSRQVHPILDYSHYSLSVSSLPL 297
+PA TSRQ P++ Y Y +V +LPL
Sbjct: 7 IPA-TSRQFRPLVRYPCYIQAVQNLPL 32
>AY113490-1|AAM29495.1| 158|Drosophila melanogaster RE47308p
protein.
Length = 158
Score = 26.2 bits (55), Expect = 8.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
+P GFA++EF D +D+ +D + G +I+V
Sbjct: 45 NPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRV 79
>AY071363-1|AAL48985.1| 200|Drosophila melanogaster RE39606p
protein.
Length = 200
Score = 26.2 bits (55), Expect = 8.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 HPKGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
+P GFA++EF +D + A ++ S G Q++V
Sbjct: 44 NPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRV 78
>AE014298-1899|AAF48264.2| 158|Drosophila melanogaster CG1987-PA
protein.
Length = 158
Score = 26.2 bits (55), Expect = 8.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 HPKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
+P GFA++EF D +D+ +D + G +I+V
Sbjct: 45 NPPGFAFVEFEDRRDAEDATRGLDGTRCCGTRIRV 79
>AE014134-1804|AAF52890.1| 200|Drosophila melanogaster CG5655-PA
protein.
Length = 200
Score = 26.2 bits (55), Expect = 8.0
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 5 HPKGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
+P GFA++EF +D + A ++ S G Q++V
Sbjct: 44 NPPGFAFVEFEHRDDAEKACDILNGSELLGSQLRV 78
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,974,175
Number of Sequences: 53049
Number of extensions: 203470
Number of successful extensions: 666
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 570126357
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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