Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_O15
(302 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 90 3e-19
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 53 5e-08
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 52 6e-08
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 52 6e-08
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 36 0.007
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 34 0.017
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 34 0.017
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 34 0.017
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 34 0.017
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 34 0.023
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 34 0.023
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 32 0.069
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 32 0.069
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 32 0.091
AF038623-3|AAB94153.2| 96|Caenorhabditis elegans Hypothetical ... 31 0.12
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 31 0.21
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 0.64
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 29 0.85
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 29 0.85
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 29 0.85
U12964-1|AAL02497.1| 465|Caenorhabditis elegans Hypothetical pr... 28 1.5
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 28 1.5
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 27 2.6
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 27 2.6
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 27 2.6
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 27 2.6
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 27 2.6
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 26 4.5
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 26 6.0
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 26 6.0
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 26 6.0
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 26 6.0
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 25 7.9
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 25 7.9
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 25 7.9
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 25 7.9
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 25 7.9
AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 25 7.9
AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 25 7.9
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 89.8 bits (213), Expect = 3e-19
Identities = 38/52 (73%), Positives = 46/52 (88%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISSTNRPP 157
GHPKGFAY+EF +K+ +Q A+AM +SL RGRQIKV PKRTNKPG+S+TNRPP
Sbjct: 116 GHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVDPKRTNKPGMSTTNRPP 167
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 52.8 bits (121), Expect = 5e-08
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGISST 145
G+ K FA++EF +SVQ A+ + ++FR R+I V KRTNKPG+ T
Sbjct: 84 GYQKNFAFVEFQKLESVQLALVLSGTMFRNRKIMVTLKRTNKPGMGRT 131
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 52.4 bits (120), Expect = 6e-08
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGI 136
K FAYIEF D S++ A+ M+ SLFR R I V KRTN PG+
Sbjct: 96 KNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRTNIPGM 137
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 52.4 bits (120), Expect = 6e-08
Identities = 24/42 (57%), Positives = 29/42 (69%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGI 136
K FAYIEF D S++ A+ M+ SLFR R I V KRTN PG+
Sbjct: 102 KNFAYIEFDDSSSIENALVMNGSLFRSRPIVVTAKRTNIPGM 143
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 35.5 bits (78), Expect = 0.007
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
G P+GFA+IEF ++ S Q A+ M+ + F GR ++V
Sbjct: 43 GRPRGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRV 78
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 34.3 bits (75), Expect = 0.017
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 130
K FA+IEF D MA D F G+Q+KV R +P
Sbjct: 230 KNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQP 269
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 34.3 bits (75), Expect = 0.017
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 130
K FA+IEF D MA D F G+Q+KV R +P
Sbjct: 230 KNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQP 269
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 34.3 bits (75), Expect = 0.017
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 130
K FA+IEF D MA D F G+Q+KV R +P
Sbjct: 205 KNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQP 244
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 34.3 bits (75), Expect = 0.017
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = +2
Query: 11 KGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 130
K FA+IEF D MA D F G+Q+KV R +P
Sbjct: 208 KNFAFIEFRSIDETTAGMAFDGINFMGQQLKVRRPRDYQP 247
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.023
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNK 127
G +GFA++EF + + A+A E +G+ ++V P ++ +
Sbjct: 67 GRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRE 108
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 33.9 bits (74), Expect = 0.023
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNK 127
G +GFA++EF + + A+A E +G+ ++V P ++ +
Sbjct: 67 GRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRE 108
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 32.3 bits (70), Expect = 0.069
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSV-QTAMAMDESLFRGRQIKVMPKRTNK 127
G PKGF ++ F D+D+ Q +++S+ G K+ R K
Sbjct: 275 GKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQK 317
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 32.3 bits (70), Expect = 0.069
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSV-QTAMAMDESLFRGRQIKVMPKRTNK 127
G PKGF ++ F D+D+ Q +++S+ G K+ R K
Sbjct: 275 GKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQK 317
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 31.9 bits (69), Expect = 0.091
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKV 106
G P+GFA++EF ++ Q A+ ++ F GR ++V
Sbjct: 44 GRPRGFAFVEFSEEAGAQRAVEQLNGVAFNGRNLRV 79
>AF038623-3|AAB94153.2| 96|Caenorhabditis elegans Hypothetical
protein T08B6.1 protein.
Length = 96
Score = 31.5 bits (68), Expect = 0.12
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 56 TAMAMDESLFRGRQIKVMPKRTNKPGISST 145
+A+ + FR R++ V KRTNKPG T
Sbjct: 27 SALVLSGFKFRNRKVTVTTKRTNKPGFGKT 56
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 30.7 bits (66), Expect = 0.21
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESL-FRGRQIKV 106
G P+GFA++EF ++ + Q A+ + F GR ++V
Sbjct: 42 GRPRGFAFVEFTEEAAAQRAVDQFNGVDFNGRALRV 77
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.1 bits (62), Expect = 0.64
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM-AMDESLFRGRQIKVMP---KRTNK 127
G KGFA +EF ++ A A+D +F+GR + ++P KRT +
Sbjct: 317 GACKGFAIVEFVFPEAAVAAYSALDGYVFKGRMMHILPGDEKRTKE 362
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 28.7 bits (61), Expect = 0.85
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKR 118
P +AY+EF + SV A+ D F+ R +K+ R
Sbjct: 203 PCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSR 239
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 28.7 bits (61), Expect = 0.85
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKR 118
P +AY+EF + SV A+ D F+ R +K+ R
Sbjct: 203 PCAYAYVEFSQQASVCNALQNDGFEFKERPLKIQHSR 239
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 28.7 bits (61), Expect = 0.85
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTA 61
G P+G+A+IE+ DK + TA
Sbjct: 141 GKPRGYAFIEYSDKAEMHTA 160
>U12964-1|AAL02497.1| 465|Caenorhabditis elegans Hypothetical
protein F26F4.5 protein.
Length = 465
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 130 RYIIDEP-SATYDARPRTRVPRRFLAILRRLPARTSRQVHPILDYSHYSLSVSSLP 294
R + DEP AT + RT V +R A +RR+ ++T +H +++ + + LP
Sbjct: 64 RRVFDEPDGATMSSPARTPVEQR-AAEIRRMNSQTEANLHKERNHAPPPMPIEGLP 118
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
G P G AY+EF + + AM D R I+V
Sbjct: 99 GRPNGEAYVEFKNTEEAGKAMENDRKEISNRYIEV 133
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
P+GF ++ F D DSV + + G + V
Sbjct: 154 PRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDV 186
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
P+GF ++ F D DSV + + G + V
Sbjct: 116 PRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDV 148
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
P+GF ++ F D DSV + + G + V
Sbjct: 116 PRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDV 148
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
P+GF ++ F D DSV + + G + V
Sbjct: 154 PRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDV 186
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 8 PKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 106
P+GF ++ F D DSV + + G + V
Sbjct: 154 PRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDV 186
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA 67
G PKGFA++ F +D A+A
Sbjct: 214 GLPKGFAFVTFESRDDAARAIA 235
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMA-MDESLFRGRQIKV 106
G KGFAY+ F ++ + TA++ ++ + F R +KV
Sbjct: 50 GSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKV 85
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P GFA++E+ D +D+ A+D S G + +V
Sbjct: 38 PPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P GFA++E+ D +D+ A+D S G + +V
Sbjct: 38 PPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 8 PKGFAYIEFGD-KDSVQTAMAMDESLFRGRQIKV 106
P GFA++E+ D +D+ A+D S G + +V
Sbjct: 38 PPGFAFVEYDDVRDAEDAVRALDGSRICGVRARV 71
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAM 64
G PKG+ +IEF D + + A+
Sbjct: 56 GKPKGYGFIEFPDIQTAEVAI 76
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +2
Query: 2 GHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV-MPKRTNKPGISSTNR 151
G+ KGF ++ +A+ + + GR+ V +P +K G S +R
Sbjct: 210 GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISR 260
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 195 VSRHTTSATGPYVAAGTPHT*LLSLL 272
+ H T T +VAAG +T LL LL
Sbjct: 208 IPHHRTGGTAMHVAAGRGYTQLLELL 233
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 195 VSRHTTSATGPYVAAGTPHT*LLSLL 272
+ H T T +VAAG +T LL LL
Sbjct: 208 IPHHRTGGTAMHVAAGRGYTQLLELL 233
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 195 VSRHTTSATGPYVAAGTPHT*LLSLL 272
+ H T T +VAAG +T LL LL
Sbjct: 208 IPHHRTGGTAMHVAAGRGYTQLLELL 233
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 195 VSRHTTSATGPYVAAGTPHT*LLSLL 272
+ H T T +VAAG +T LL LL
Sbjct: 208 IPHHRTGGTAMHVAAGRGYTQLLELL 233
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 195 VSRHTTSATGPYVAAGTPHT*LLSLL 272
+ H T T +VAAG +T LL LL
Sbjct: 208 IPHHRTGGTAMHVAAGRGYTQLLELL 233
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 195 VSRHTTSATGPYVAAGTPHT*LLSLL 272
+ H T T +VAAG +T LL LL
Sbjct: 208 IPHHRTGGTAMHVAAGRGYTQLLELL 233
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 195 VSRHTTSATGPYVAAGTPHT*LLSLL 272
+ H T T +VAAG +T LL LL
Sbjct: 208 IPHHRTGGTAMHVAAGRGYTQLLELL 233
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 195 VSRHTTSATGPYVAAGTPHT*LLSLL 272
+ H T T +VAAG +T LL LL
Sbjct: 208 IPHHRTGGTAMHVAAGRGYTQLLELL 233
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 195 VSRHTTSATGPYVAAGTPHT*LLSLL 272
+ H T T +VAAG +T LL LL
Sbjct: 208 IPHHRTGGTAMHVAAGRGYTQLLELL 233
>AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide
symporter OPT-3 protein.
Length = 701
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 153 GRFVDDIPGLFVRLGITFIWRPLNNDSSI 67
G +VD IPG+ + W P N+ S +
Sbjct: 507 GSYVDVIPGIISDPNVRLYWGPKNSCSGV 535
>AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide
transporter protein 3 protein.
Length = 701
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 153 GRFVDDIPGLFVRLGITFIWRPLNNDSSI 67
G +VD IPG+ + W P N+ S +
Sbjct: 507 GSYVDVIPGIISDPNVRLYWGPKNSCSGV 535
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,989,805
Number of Sequences: 27780
Number of extensions: 101167
Number of successful extensions: 310
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 323867940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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